Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq47 93.3 3e-14 seq41 82.4 6e-11 >seq47 Length=1426776 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||| ||||| || || ||| |||| | || || | ||||| || ||||| Sbjct 447448 TCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAG 447389 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || |||||||||||||||| ||||| ||||||||||| ||||| || ||| | Sbjct 447388 ATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTA 447329 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||| || |||| ||||| || ||||| || | || || || Sbjct 447328 TCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACG 447269 Query 48756 AAAATCTGCAT 48766 || || ||||| Sbjct 447268 AAGATTTGCAT 447258 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || ||||| ||||||||||| ||| | || |||| || | ||| Sbjct 446951 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 446892 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| ||||| || |||| || || || || | ||| | |||||||||||| |||||| Sbjct 446891 CTTGCCGGCGAAAATCAAACGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 446832 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || ||| | | || || || | ||| ||||| | || || || || || || Sbjct 446831 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 446772 Query 48743 CAAAGTTTTTACAAAAATCTGCATCGTG 48770 | || || || || |||||||| ||| Sbjct 446771 TAGGGTCTTGACGAAGATCTGCATGGTG 446744 >seq41 Length=801936 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638 || || || ||||| || || ||| |||| | || || | |||||||| || || ||| Sbjct 757745 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 757804 Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||||||||| |||| ||||| |||||||||||| Sbjct 757805 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 757839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936499685551