Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq47 93.3 3e-14
seq41 82.4 6e-11
>seq47
Length=1426776
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|| || ||||| ||||| || || ||| |||| | || || | ||||| || |||||
Sbjct 447448 TCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAG 447389
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|| |||||||||||||||| ||||| ||||||||||| ||||| || ||| |
Sbjct 447388 ATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTA 447329
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | || || | ||| || |||| ||||| || ||||| || | || || ||
Sbjct 447328 TCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACG 447269
Query 48756 AAAATCTGCAT 48766
|| || |||||
Sbjct 447268 AAGATTTGCAT 447258
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||| || ||| ||| || ||||| ||||||||||| ||| | || |||| || | |||
Sbjct 446951 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 446892
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||| ||||| || |||| || || || || | ||| | |||||||||||| ||||||
Sbjct 446891 CTTGCCGGCGAAAATCAAACGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 446832
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
|| ||| | | || || || | ||| ||||| | || || || || || ||
Sbjct 446831 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 446772
Query 48743 CAAAGTTTTTACAAAAATCTGCATCGTG 48770
| || || || || |||||||| |||
Sbjct 446771 TAGGGTCTTGACGAAGATCTGCATGGTG 446744
>seq41
Length=801936
Score = 82.4 bits (90), Expect = 6e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638
|| || || ||||| || || ||| |||| | || || | |||||||| || || |||
Sbjct 757745 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 757804
Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||||||||| |||| ||||| ||||||||||||
Sbjct 757805 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 757839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936499685551
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |