Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq14 230 4e-55 seq43 165 2e-35 >seq14 Length=298472 Score = 230 bits (254), Expect = 4e-55 Identities = 808/1235 (65%), Gaps = 69/1235 (6%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || || |||||||| || ||||||||||||||| ||| ||||| ||| | |||||||| Sbjct 73840 GTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAG-CTCACGAGCCTCGGG 73782 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 || ||||||||| ||||| | | ||||| | ||||| || ||||| || || | | Sbjct 73781 GGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCGGCAAGACCCTGAACACCAAGA 73724 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 || ||||| | ||| | | |||| | ||| | || |||| || || || ||| | Sbjct 73723 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGG-ACAGGGTAGTGGTTCA 73666 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||| ||||| || | | || | | |||| | |||||||| | Sbjct 73665 CATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAGCTTCTTGA 73606 Query 221652 GATTGAACACCAACTCGCCGC--CGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709 | | | ||| ||| | ||| || || | ||| |||||| Sbjct 73605 AGTCGTAG--CAA---GCCTCATCGTAGTTGATG----------AAGG----AGGGCAGA 73565 Query 221710 GCT-----GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCT 221764 | | ||| ||||| || ||||| |||||||| | |||| || || || Sbjct 73564 GATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCA 73505 Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824 || || || ||| || |||||| || |||| || || ||| |||||| ||| Sbjct 73504 GTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAG 73445 Query 221825 GCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCC 221884 || |||||||||||||| || || || ||||| ||| ||| | ||||| || | Sbjct 73444 GCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 73385 Query 221885 CAGAGTTCTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATA 221937 || || | |||| || | | |||| | |||| | || |||| |||||| || Sbjct 73384 CAAAGCT-TCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTA 73326 Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC 221997 | ||||| | | |||| || ||||| ||| | ||||| || ||| Sbjct 73325 C-------AGAGCCT--CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATT 73275 Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 ||| ||||| || |||||| ||| | | || | || |||||| || || ||||| Sbjct 73274 GGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGAT 73215 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 ||| || || | || || || | || || ||||||| |||| ||| || | || Sbjct 73214 CCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAG 73155 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 ||| | ||||| || | || | |||||| ||||| || |||| ||| | ||| ||||| Sbjct 73154 ATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGG 73095 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCG 222236 |||||||||||||||||| || | ||| | ||| | |||||||| ||||| | | Sbjct 73094 TCGCTTGTTGCCACCCTGGTCGA-CATACCGAGCAGTGTTGTTGAAGACACGAAGCATAG 73036 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | || | ||||| ||| ||||||||| || ||||| | || || | || Sbjct 73035 GAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC---GGA 72979 Query 222297 TACTG-GCAGA--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGA 222353 ||| | ||| | || || |||||||| || || ||||||||||| ||| |||||| Sbjct 72978 TACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGA 72919 Query 222354 GAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACA 222413 |||| || ||| ||||| ||| ||| ||||| | | | || || ||||| |||| Sbjct 72918 GAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACA 72859 Query 222414 TCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCC 222473 || | | | || | ||| || || |||||||| || || || ||| | | Sbjct 72858 ATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGC 72799 Query 222474 TAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCAT 222531 | |||||||| | ||| ||||| | ||||| |||| | || ||| || | | || Sbjct 72798 TTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA- 72740 Query 222532 GGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGC 222589 | | || | |||| ||||| ||| || | ||| ||| || | | || ||| Sbjct 72739 GACACA-CGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATCT--TGAGG 72683 Query 222590 AGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624 ||||| ||| |||| ||||||||| |||||||| Sbjct 72682 AGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 72648 >seq43 Length=937570 Score = 165 bits (182), Expect = 2e-35 Identities = 381/571 (67%), Gaps = 11/571 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||| | || |||||| || || |||||||| || Sbjct 868149 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 868090 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | ||| |||| || || || | || |||||| || || Sbjct 868089 TCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTGCCGATGAGCAGTTCTTCGTCTC 868031 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || ||||| || |||||||||||||| || |||||||| || |||| | Sbjct 868030 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 867971 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||||| | || || ||| | ||||| ||||||||||| |||||||| || Sbjct 867970 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 867911 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| || || || || || || || || | || Sbjct 867910 GGAGAACATTCACTCCGAGACCTACTCC---CTCCTCATCGACACCTATATCAAGGAGCC 867854 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 |||| || || || || ||||| ||| ||| ||| ||||| | |||||| Sbjct 867853 CGCCCAGCGAACCTACCTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGC 867794 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||||| |||||| | || | || | |||| | | || || || || Sbjct 867793 TGACTGGGCCATCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGC 867734 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 || |||||||| ||||| ||||| ||||| ||| | || || | || ||||||||||| Sbjct 867733 TTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAA 867674 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||||| || ||| ||| || |||||||||||| | |||||||| Sbjct 867673 GAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGG 867614 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||| |||| || ||||||||||| ||| || Sbjct 867613 TCTTCACACTGACTTTGCCTGCCTCCTCCAC 867583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842048297280