Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq21 129 7e-25 >seq21 Length=1169343 Score = 129 bits (142), Expect = 7e-25 Identities = 343/516 (66%), Gaps = 15/516 (3%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || |||||||| || || || || ||||||||||| ||||| || Sbjct 445680 ACAGCGATAGGGCCAACACCAGGACCGCCGCCGCCGTGGGGAATACAGAAGGTCTTGTGG 445621 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 445620 AGGTTGAGATGGCAGACATCAGCACCAATGTCACCGGGGCTGCAGAGACCAATCTGAGCG 445561 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 445560 TTCATGTTGGCACCGTCCATGTAGACAAGACCGCCATGCTCGTGGACAAGATCACAGACT 445501 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 445500 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAAGTAACCATGATAGCAGCA 445441 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTT---CTCTAGATCTTTGATGTCTATGTTGCCA 138479 || ||| | | | || || ||| || ||||| | ||| || | ||| ||| Sbjct 445440 AGCTCATCAGCGTGCTTG---GCACACTTGGCCTTGAGATCCTCGATATCCAGGTTACCA 445384 Query 138480 -TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| Sbjct 445383 GTCTTGCCGTCACACTTGACAGTAACAACCTTCATGCCAGCCATGGCAGCAGAAGCAGGG 445324 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCC 138595 || || || || || || |||| || || || || |||| ||||| | || || || Sbjct 445323 TTGGTACCGTGAGCAGAAACTGGGATAAGGCAGACCTTTCGCTTATCTCCATCACGAGCC 445264 Query 138596 TTGATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTA 138653 | | || || || | ||| || | || || ||| |||||||||| | || | ||| Sbjct 445263 TCG-TGGTAAGCCTTGATACAGCGA--AGACCAGCAAACTCACCCTGAGCACCAGAGTTG 445207 Query 138654 GGTTGTAATGATATAGAATCAAAACCTGTGATATCA 138689 || || | | ||| || | ||| ||||| ||| Sbjct 445206 GGCTGAAGAGTGGTAGCGTCCATACCGGTGATCTCA 445171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996684717240