Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq14 168 2e-36
seq43 156 1e-32
seq4 107 6e-18
seq1 107 6e-18
>seq14
Length=298472
Score = 168 bits (186), Expect = 2e-36
Identities = 573/881 (65%), Gaps = 19/881 (2%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || | ||| ||| ||| || || || || |||||| || | ||||| |||||
Sbjct 73520 GTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 73461
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
| || | ||| || ||||||||||| || ||| ||||| |||| ||||| |||| ||
Sbjct 73460 ACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 73401
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809
|| ||||| ||| || | | || || || |||| |||| ||
Sbjct 73400 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTT 73341
Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||| || |||| || | ||| | | | ||||| ||||| || || || ||||||
Sbjct 73340 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 73283
Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924
|||| || |||||| | || | ||| | || || | | |||||| ||| ||
Sbjct 73282 CACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAA---CACGCTTCATGAAA 73226
Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984
| |||| ||||| ||| ||||||||| | || |||||| | |||||
Sbjct 73225 AGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGG 73166
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||| || || || | ||| || | ||| | || ||||| || || || |||
Sbjct 73165 TTCTTACGGAGATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCA 73106
Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
||| ||| | |||| |||||||| || |||||||||||||| || |||||||||
Sbjct 73105 AAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACA 73046
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| |||||||||| | ||| || || || || ||||| ||| || | || ||||
Sbjct 73045 CGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTA 72986
Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCA 156220
| || | | || | || || ||||||||||| | |||| || || || || ||
Sbjct 72985 GCACGGATACGGTGCACATTCAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACA 72927
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGC 156279
||| | ||||| | | || || |||||| || || | ||| | | ||| |||
Sbjct 72926 GGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA-AGC 72868
Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339
| || ||||| || | || || || || ||||| || || || | ||||| | |
Sbjct 72867 AAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA 72808
Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGA 156398
| |||| | ||||| | |||||||||| | ||| | || | |||| |
Sbjct 72807 AGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAG- 72749
Query 156399 ATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATT 156458
|||| | ||| || | ||| ||| ||||| || ||||| |||||| || |||||
Sbjct 72748 ATACCAACAGACACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATC 72689
Query 156459 CGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| ||||||| || |||| ||| || || || || ||
Sbjct 72688 TTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 72648
>seq43
Length=937570
Score = 156 bits (172), Expect = 1e-32
Identities = 351/523 (67%), Gaps = 6/523 (1%)
Strand=Plus/Minus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| || ||| || || || | ||||| |||||| || || || || || |
Sbjct 867947 CCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCT 867888
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424
| || || || || || || ||||| || ||| |||| | | || |||||||
Sbjct 867887 ACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGCCCAGCGAACCTACCTTTTCAACG 867828
Query 133425 CCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483
||||| | || |||| || || |||||| |||||||||| || |||||||||
Sbjct 867827 CCATT-GAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA 867769
Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543
|| ||| | ||||| |||||||||||||| |||| || ||||| || ||
Sbjct 867768 GATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTC 867709
Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603
||||||||||| ||| ||||||||| ||||| || ||||||||| | | ||||| |||
Sbjct 867708 TTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTG 867649
Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663
|| |||||||| || || || | ||||||| |||||||| || |||||| |
Sbjct 867648 ACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTC 867589
Query 133664 CTTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAA 133723
|| |||||| | || || | | || ||| | | |||| |||| || || | ||
Sbjct 867588 CTCCACTCTCACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGAT 867529
Query 133724 GCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC--GTGCCGTTTAATTGGTA 133781
|| || ||||| || || ||| | ||||| || ||||| || | || |
Sbjct 867528 GCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTT--CTCGGCA 867471
Query 133782 TGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGA 133824
|||| || || ||| ||| || ||||| || || |||||
Sbjct 867470 TGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGA 867428
>seq4
Length=506884
Score = 107 bits (118), Expect = 6e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | | || || ||||| | | ||||||| || | ||| | || ||
Sbjct 215746 ATGAGTCCACAAATCTCGCAGACGTGGACACGGAAAGCATCCGACACCTCAAACAGACGC 215805
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| || ||||| || | ||||||||||||||| |||||||| |||||
Sbjct 215806 TCCTTCAGGAAAGCAGCGGCACCATGAGCAATCATACAATCACGTTCCATTTCTCCGAAT 215865
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570
|| ||||||||||| ||||| | ||||||| ||||||| || ||
Sbjct 215866 CGGAGACCACCATCACGAGCACGACCCTCGACAGGCTGTCGGGT 215909
>seq1
Length=307104
Score = 107 bits (118), Expect = 6e-18
Identities = 189/273 (69%), Gaps = 2/273 (1%)
Strand=Plus/Plus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | ||| | || || |||||||||||||| ||| | || || || ||
Sbjct 74935 TCTTCCAGAGCCTTAACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACCGCA 74994
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690
|||||||| ||||| | |||||| |||| || |||||||| | ||| | || || ||
Sbjct 74995 GTATCAATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTC-GCTGGGAGTGAG 75053
Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750
|| | | | ||| |||| || || ||||| ||||| || || | ||| ||||||
Sbjct 75054 ACCACGGAGGTAAGAGTTCTCGACAAAGCCACGGGCCTCAGGTGAGTAATCGTCCTTGGT 75113
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
||||| || | || | | || | ||| | || |||||||| || ||||| | ||
Sbjct 75114 GAAGTGAGGTAATGTGCGATACTTGAAACCGAAAGGAATACGCTTGCCTTCAACAATTTG 75173
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
||| || | || | |||| || ||||||||
Sbjct 75174 CTGACCGACAAGCGCAGTCATTTGAGAAATATT 75206
Score = 89.7 bits (98), Expect = 2e-12
Identities = 104/140 (74%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| | || || || |||||||| ||||||||
Sbjct 74158 AGAATTTCCTTGAGACGTGGCACACCAAGAGTAACATT---CTTGGACGACACACCAGCG 74214
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||| || ||||| || | ||||||| |||||||||||| || || || |
Sbjct 74215 AAATGGAAGGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGA 74274
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 74275 ACACCAACCATTTCACCAGG 74294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471813130733869
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |