Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq34 138 1e-27 seq47 134 1e-26 >seq34 Length=1002739 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| | | | ||||||||||||||||| Sbjct 517004 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 517062 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| ||||||||||| || |||||||| |||||||| |||||| ||| Sbjct 517063 AGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 517122 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | |||||| || | ||||| || || || || || || Sbjct 517123 GACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGT 517182 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 517183 CTTGACGAAAATCTGCAT 517200 >seq47 Length=1426776 Score = 134 bits (148), Expect = 1e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || |||||||| | ||| |||||| ||||||||||| Sbjct 446944 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 446885 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | || ||||||||||| |||||||| |||||||| ||||| |||| Sbjct 446884 GCGAAAATCAAACGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 446825 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | ||| || |||| ||||| ||| |||||||| || || Sbjct 446824 ACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTC 446765 Query 133644 TTTACGAAAATCTGCATGG 133662 || ||||| |||||||||| Sbjct 446764 TTGACGAAGATCTGCATGG 446746 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || || || |||| || ||| ||| | || || | |||||| || Sbjct 447682 GTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCA-TCTTCCAACTGCTTACC 447624 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || || || ||||| ||||| || ||||| ||| Sbjct 447623 AGCGAAGATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGAATCTTGCTCTT 447564 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | | ||| || || | ||||| ||| || || || ||||| Sbjct 447563 CACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGT 447504 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 447503 CTTCACGAAAATCTGCAT 447486 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || || ||||| || ||||| ||| | | || ||| ||| || || | Sbjct 447233 ATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGACC-GTCTTCCAGTT 447175 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || |||| || ||||||||||| |||||||| || |||||||| ||||| Sbjct 447174 GCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCT 447115 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | || | || |||| | ||| || || | |||| ||| ||||| | Sbjct 447114 TCGACTTAACATTGTCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAG 447055 Query 133636 TCAGAGTTTTTACGA 133650 | || || || |||| Sbjct 447054 TGAGGGTCTTGACGA 447040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419367865880