Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq47 98.7 7e-16
>seq47
Length=1426776
Score = 98.7 bits (108), Expect = 7e-16
Identities = 161/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605
||| |||||| ||| || || ||||||||||| ||||| ||||| |||| || | ||
Sbjct 446951 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 446892
Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665
|| ||||| ||||||||||| ||||| || | || | || || ||||| ||| ||
Sbjct 446891 CTTGCCGGCGAAAATCAAACGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 446832
Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
| | |||| ||| | |||||| || || || || | ||||| || || || |
Sbjct 446831 -GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 446773
Query 33725 TTAACGTTTTTACAAAGATCTGCATAGTTGGTGTG-TTTATCGCGCAA 33771
||| || || || ||||||||||| || | ||| | | ||||| ||
Sbjct 446772 TTAGGGTCTTGACGAAGATCTGCATGGTGGCGGTGATCTGTCGCGAAA 446725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703050559040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |