Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq47 102 8e-17 seq34 84.2 2e-11 >seq47 Length=1426776 Score = 102 bits (112), Expect = 8e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || ||||| |||||||||| ||| || |||||| | ||| ||||| | Sbjct 447681 TTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAG 447622 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| |||||||| ||||| || || ||||| || ||||| ||| || |||| Sbjct 447621 CGAAGATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGAATCTTGCTCTTCA 447562 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | ||| || | | ||| || || | || | || || ||||| ||||| | Sbjct 447561 CGTTGTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCT 447502 Query 132108 TTATGAAAATCTGCAT 132123 | | |||||||||||| Sbjct 447501 TCACGAAAATCTGCAT 447486 >seq34 Length=1002739 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||||| ||| || ||| |||||||| || || | | Sbjct 517007 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 517066 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || || || ||||| || || || || || || | Sbjct 517067 AAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 517126 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | |||||| || | || | ||| || || || || || || Sbjct 517127 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTG 517186 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 517187 ACGAAAATCTGCAT 517200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609788039320