Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq43 178 2e-38
seq14 105 1e-16
>seq43
Length=937570
Score = 178 bits (196), Expect = 2e-38
Identities = 354/511 (69%), Gaps = 20/511 (4%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||| ||||| ||||| ||||| || |||||| | ||||
Sbjct 868150 GATTTGGCAAATGTAC-AAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACC 868092
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
|| | || |||| ||||| ||| ||| | ||| |||| |||
Sbjct 868091 TCTCCAAGGATCTCCACG----ACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTC 868036
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
|| ||| |||| || ||| ||||| ||| ||||| || || ||||||||| |
Sbjct 868035 GTCTCTCACATCCTTGC-TTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGT 867977
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| || || | |||||||| | || ||||| |||| || ||||| ||||||||
Sbjct 867976 CGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGAT 867917
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||| ||||| || |||||||| ||||| ||||||||||| |||||||
Sbjct 867916 CATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGA 867857
Query 1456068 CCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126
|| | | || | ||| |||| || |||||| || || | || | | | || |
Sbjct 867856 GCCCGCCCAG-CGAACCTACCTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGA 867798
Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTCGACACTTTGCCGAGCGGC 1456185
|||| |||||||| || |||||| |||| | || ||| | ||||||| | || |
Sbjct 867797 AGGCTGACTGGGCCATCCGATGGATC--CAAGATAAGGACTCTTC-CTTTGCCCAACGTC 867741
Query 1456186 TCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTT 1456244
|||| | || || || || ||||| ||||| ||| || ||| | | || || |
Sbjct 867740 TCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCT 867681
Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||||||| || |||||||| |||||
Sbjct 867680 GGCTCAAGAAGCGTGGTCTCATGCCTGGTCT 867650
>seq14
Length=298472
Score = 105 bits (116), Expect = 1e-16
Identities = 178/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||||||||| ||||||||||| || | || || || || ||||| || | ||
Sbjct 72822 CCCACGCTCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGAT 72881
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| ||||| || || |||||| || || | ||||||
Sbjct 72882 ATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCC 72941
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| ||| || || || ||| | | ||| | || || | ||| | ||| |
Sbjct 72942 AAGATGGCTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGGCTCATACATC 73001
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || |||||||| || ||||| | || || |||||||| || || ||| ||||
Sbjct 73002 GCCGGTACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACT 73061
Query 260165 GCGCGCTACGTCGACCAG 260182
|| || || |||||||||
Sbjct 73062 GCTCGGTATGTCGACCAG 73079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177788340914394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |