Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15]
237 sequences; 44,205,264 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq43 104 7e-17
>seq43
Length=937570
Score = 104 bits (114), Expect = 7e-17
Identities = 348/531 (66%), Gaps = 17/531 (3%)
Strand=Plus/Minus
Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408
||||||||||| ||||||||||| | ||| |||||| | || || || | ||||
Sbjct 868104 GAGGAGATTGACCTCTCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAG 868045
Query 443409 CGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGT 443465
| | |||||| | |||| | || ||||| || | || ||||| |||
Sbjct 868044 C---AGTTCTTCGTCTCTCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAAC 867988
Query 443466 GAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTAC 443525
||||| || || ||| ||| | ||| | | ||||||| || | ||||||
Sbjct 867987 GAGAACCTCGTCGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTAC 867928
Query 443526 GCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACA 443585
| ||||| | ||||||||||||||| ||||| |||| | | ||| | ||
Sbjct 867927 GGCTTCCAGATCATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACAC- 867869
Query 443586 CTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCATCGTTCAT---GACCACGCC 443641
||| || || || || ||||| || | ||| ||| || ||| ||||| ||
Sbjct 867868 CTATATC--AAGGAGCCCGCCCAGCGAACCTACCTTTTCAACGC-CATTGAGACCATTCC 867812
Query 443642 AGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTCAGC-T 443700
||||| | ||| || |||||| | | ||| || || || || ||| | |
Sbjct 867811 CTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAA-GATAAGGACTCTTCCT 867753
Query 443701 TCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTA 443760
| | | | || || || ||||| |||| || || || | || || || || || ||
Sbjct 867752 TTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGT-GCCTTC 867694
Query 443761 GCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAA 443820
||||| || |||||| | || |||||||| || |||| ||||||||||| ||||||
Sbjct 867693 GCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAG 867634
Query 443821 CTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871
|| ||| ||| ||||||||| | || ||||| ||||| || ||| ||
Sbjct 867633 CTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCAC 867583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588331176918465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |