Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq14 230 3e-55 seq43 118 1e-21 seq7 87.8 2e-12 >seq14 Length=298472 Score = 230 bits (254), Expect = 3e-55 Identities = 1129/1761 (64%), Gaps = 57/1761 (3%) Strand=Plus/Minus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TG 110412 |||| || || || |||||||| || |||||||| || | ||||| || | || | || Sbjct 74446 GCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTG 74388 Query 110413 CATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTT 110470 |||| | || |||| |||||| || | |||| || ||||| ||| |||| Sbjct 74387 CATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACT- 74329 Query 110471 TGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATT 110527 | ||||||||| || || | || ||||| | | ||| || || | || Sbjct 74328 -GATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGAC---CTGGCGCTGAGAGATC 74273 Query 110528 TCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATG 110587 |||||||| || ||| ||| ||||| ||| | ||||| | | || ||||| ||| Sbjct 74272 TCCCAAACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATG 74213 Query 110588 GAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTG 110647 ||||| | | | ||| | | ||||||| | | |||||| ||||| || | Sbjct 74212 GAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACA 74153 Query 110648 AGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGG 110707 ||||| |||| || |||||||| |||||||| ||||| | | || Sbjct 74152 AGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGG 74093 Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 ||||| || | ||||| || || ||||| || || || |||| || || | ||| | Sbjct 74092 TAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTG 74033 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC- 110826 || || ||||| || || | | ||||||||||| | || | ||||| | | | Sbjct 74032 GCAGTAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGA--CTTCCT 73975 Query 110827 CTTGA-GAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || || || | |||||||| || | || || || || |||| ||||||| ||||| Sbjct 73974 CTCGAAGAGCCTCCCAGTCCCAGAGGTCAGAG-GGCTTGACGTTCC-ACATGTCGAACTG 73917 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | || | || ||||| ||||||| ||||| |||| ||| | | | ||| Sbjct 73916 GAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGC 73857 Query 110944 CAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 || | ||| | || || | |||||||| ||||| |||||||| | ||| | Sbjct 73856 CAGCTGCACGGAG-GCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGA 73798 Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGA 111061 ||| || || || || || | ||| || | || || |||| || ||| Sbjct 73797 GCTCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAGA 73739 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 || |||||||| | |||||| |||| ||| ||||| ||| || || || || || Sbjct 73738 CCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGACA 73679 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || || || |||| ||| || || |||||| || ||| | Sbjct 73678 GGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTG 73619 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCG 111238 || || || | | || | || || ||| || | ||| | || || | Sbjct 73618 TGCAGCTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGTTGATGAAGGAGGGCAGAGAT 73562 Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298 | || || | ||||| || || ||| || | |||||| | |||||| || Sbjct 73561 AGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTG 73502 Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358 || | ||||| || || || || | ||||||||||||||||| |||||| ||| Sbjct 73501 CAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCA 73442 Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAA 111418 ||||||||||||||| | || | || ||||| ||||| | | ||||| || | |||| Sbjct 73441 TCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAA 73382 Query 111419 A-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTA 111474 | | || | | || | || | ||| | || | ||| || |||||||||| ||| Sbjct 73381 AGCTTCTGAGCCTTG----ATCGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTA 73326 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 || || || |||||||| || ||||| ||| || || || | || || | Sbjct 73325 CAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACAT 73266 Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG- 111593 ||| | ||| | ||| | |||||| |||||||||||||| || || ||||| |||| Sbjct 73265 AAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGC 73206 Query 111594 ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 | | ||| || || | ||| || |||| || | ||| ||||| || | |||||| Sbjct 73205 AAGGAAA-AGGTCACGGGCACGGA-CCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGG 73148 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---A 111709 ||||| | || ||| | |||||| ||||| || |||| || | || || ||| Sbjct 73147 AACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTG 73088 Query 111710 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 111769 ||| | || | ||||| || || ||| ||| || || |||||||| |||| | | Sbjct 73087 TTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACA 73028 Query 111770 CCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGA 111827 || | ||| ||| || || || ||| || ||| | | || | | | || | Sbjct 73027 CCGTTCGATGTACCGTTGGTACCGGCGATGTATGAG--CCAGTAGCACGGATACGGTGCA 72970 Query 111828 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 111887 | || |||||||| |||||| ||| ||||| ||||| | | ||||| | | Sbjct 72969 CATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGT 72910 Query 111888 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 111947 |||| || | || ||| ||||| | | | | ||||||| |||| || || Sbjct 72909 AGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCT 72850 Query 111948 TTGGTGTACCAGCATTGAAGAGGGTTGGTG----TTGCGTGAATGAACATACCTTGGGAC 112003 || || || ||||||||||| || || | |||||||| |||| | | | ||| Sbjct 72849 GAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAA-GAACTTGCTT---GAC 72794 Query 112004 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACC 112063 ||| || ||||||||||||||| || || || || || ||| || | | || Sbjct 72793 ATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACA 72734 Query 112064 CGCATGAACATGTACTGTGGG 112084 ||||||| ||||| ||||||| Sbjct 72733 CGCATGATCATGTGCTGTGGG 72713 >seq43 Length=937570 Score = 118 bits (130), Expect = 1e-21 Identities = 302/457 (66%), Gaps = 16/457 (4%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| | || |||||||| |||||||||||||| || ||||| ||||||||||| Sbjct 867308 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 867367 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485 ||||| || || || | || || | | | | || |||| |||| Sbjct 867368 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 867422 Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545 ||||||| | || |||||||||||| ||| ||||||||||| |||| ||| Sbjct 867423 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG 867482 Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 ||| || || || || || |||| | | ||||| || || || | | ||| Sbjct 867483 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 867542 Query 122606 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 122662 | || || | | | ||| | | || | || | || ||| || ||||| Sbjct 867543 CTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAA 867599 Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722 | || ||| |||||||| || || || || || || || |||||| ||||| |||| Sbjct 867600 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCA 867659 Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 122782 ||||||| |||||||| | ||| |||||| | ||| | || |||||||||||||| Sbjct 867660 TGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCT 867719 Query 122783 CCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 | ||| || || |||| || |||| ||| ||||| Sbjct 867720 CAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGA 867756 >seq7 Length=566322 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 164605 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 164664 |||| || |||| || ||||| ||||||||| |||||| ||| | || || | Sbjct 308535 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 308476 Query 164665 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 164724 |||| || ||| |||| || ||| | ||||| ||| | |||||||| || || Sbjct 308475 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 308416 Query 164725 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 164777 ||||||||||| ||| | || || ||||| || |||||||| || |||||| Sbjct 308415 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 308363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030139455200