Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq14 215 6e-51 seq43 170 2e-37 >seq14 Length=298472 Score = 215 bits (238), Expect = 6e-51 Identities = 1083/1697 (64%), Gaps = 45/1697 (3%) Strand=Plus/Minus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATA-TG 117886 |||| || || ||||||||||| || |||||||| || |||||||| | | || | || Sbjct 74446 GCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCAGCC-TGCAAAGTG 74388 Query 117887 CATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 117946 ||| || | |||| | || || | |||| || ||||| ||||| || Sbjct 74387 CATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTG 74328 Query 117947 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 118006 ||| |||||| || ||||| || ||||| | | || | | ||| ||||| Sbjct 74327 ATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGACCTGGCGCTGAGAGATCTCCCA 74268 Query 118007 CACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCC 118066 |||||| | || || ||| | ||| | ||||| | || || || ||||| || Sbjct 74267 AACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC 74208 Query 118067 ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATC 118126 | | | | ||| | | ||||||| | | ||||| ||||| || | || || Sbjct 74207 ATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTC 74148 Query 118127 CTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGAT 118186 || | || |||||||| |||||||| ||||| || | | ||||| Sbjct 74147 CTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGAT 74088 Query 118187 ATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGT 118246 ||||| ||||| ||||| |||||||| ||||| |||| || |||| || ||| || Sbjct 74087 ATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGT 74028 Query 118247 GGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC-CTTGA 118305 ||||| || || | ||| || |||||||||| || | | | | | | | | || || Sbjct 74027 AGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGA--CTTCCTCTCGA 73970 Query 118306 -GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 118364 |||| |||||||| || | | || | | |||||| || |||||||| ||| Sbjct 73969 AGAGCCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGTTCCACATGTCGAACTGGAGAATA 73910 Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT-- 118422 || | || || || || |||| || || || || ||||| ||| |||| | Sbjct 73909 CCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGC 73850 Query 118423 -CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCC 118481 ||||| || ||| || |||||||| || || ||||| || | ||| | | Sbjct 73849 ACGGAG---GCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAGCTCA 73793 Query 118482 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTG 118540 |||||| ||| || || | | || || | || || |||| || ||||| || Sbjct 73792 CGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAGACCCTG 73734 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATA 118600 ||||| || ||||| || || || | ||| ||| || ||||| || || || || Sbjct 73733 AACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGACAGGGTA 73674 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 ||| |||||| | | | || || || | ||||||| ||| | || || Sbjct 73673 GTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAG 73614 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC---GATTGA 118717 ||| | | | || | || || ||| || | | | | | | ||||| ||| || Sbjct 73613 CTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGT--TGATGAAGGAGGGCAGAGATAGA 73559 Query 118718 C--GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775 || || || || || | | ||| || || |||||| |||||||| ||||| Sbjct 73558 GAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAA 73499 Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835 | || || || ||||| || | ||||||||| || ||| ||| || |||||| Sbjct 73498 AGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCC 73439 Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894 ||||| |||||| |||| | || ||||| || |||| || ||||| || | ||| | | Sbjct 73438 TTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGC 73379 Query 118895 ATCGGCAGCTGGCAC-AGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGG 118953 || | || | | | ||| || |||| ||| |||||||||| ||| || | Sbjct 73378 TTCTGAGCCTTGATCGTCTTGCG-ACCCTTGCCCGCCTT-CTCGTACTTTTCGTACAGAG 73321 Query 118954 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 119013 | || ||||| || || | || | ||| || || || || ||||| | || | Sbjct 73320 CCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTG 73261 Query 119014 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 119073 ||| | ||| || |||||| ||||||||||| || || |||||||| || || || Sbjct 73260 TCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGA 73201 Query 119074 AGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 119133 | || || || || | || || | || || || ||| | || | || || | Sbjct 73200 AAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGA 73141 Query 119134 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACGAC 119187 || ||| | |||||| || || ||||| | || | | || | ||| | | | Sbjct 73140 AGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GTTG-C 73084 Query 119188 CAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCAT 119247 || |||||| ||||||| |||||| ||| || ||||||||||| |||| || ||| | Sbjct 73083 CACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGT 73024 Query 119248 CGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTG 119305 ||| || || || || ||| || ||| | | | || | || | ||| | | Sbjct 73023 TCGATGTACCGTTGGTACCGGCGATGTATGAGCC--AGTAGCACGGATACGGTGCACATT 72966 Query 119306 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 119365 || ||||||||| || ||| ||| ||||| || || | ||||| | ||||||| Sbjct 72965 CAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 72906 Query 119366 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGG 119425 || || || ||| |||| | | | | |||||| |||| ||| ||| || Sbjct 72905 TCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGG 72846 Query 119426 TGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTG 119483 || || || |||||||| || || | || || ||| | | |||| |||||| | Sbjct 72845 GGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTTGACATCAGG 72788 Query 119484 TCGTAGGTCTCCAAGAC 119500 | ||| ||||||||||| Sbjct 72787 TTGTATGTCTCCAAGAC 72771 >seq43 Length=937570 Score = 170 bits (188), Expect = 2e-37 Identities = 534/813 (66%), Gaps = 17/813 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||| ||||||||||||||||| ||||| ||| | | | ||| || ||||| Sbjct 867308 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 867367 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | |||| |||||||| Sbjct 867368 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-CCAAGAGCGACAAGGAGACG 867426 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||||| ||| || |||||||| |||| ||| ||| Sbjct 867427 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACA 867486 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || || |||| ||| |||||| || || || | ||| | || Sbjct 867487 GGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATATCTTG 867546 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| ||| | ||| || | | || | || | || ||| || |||||| || Sbjct 867547 AATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 867603 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || |||||| |||||| |||||||| Sbjct 867604 AGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAG 867663 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | ||||||||| | || | ||| ||||||||| ||||| || Sbjct 867664 ACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAAC 867723 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203 | ||||| |||| |||||| | |||||||| | ||| | | ||| || Sbjct 867724 AGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTGGATCCATCGGAT 867783 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGAGTTCCT 130262 ||||| | ||||| || ||| || || | ||||| || || || ||| || | Sbjct 867784 GGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGGTAGGT 867843 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 || | | || || ||||| || | || ||||| || || || ||| || | Sbjct 867844 TC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAA 867902 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | |||||||| | || || ||| ||||| ||||| Sbjct 867903 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGACCTC- 867960 Query 130382 TCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 130440 | | ||| | | || ||||| ||||| ||||| || |||| || || || Sbjct 867961 GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGAAAGC 868020 Query 130441 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 130497 ||||| | | ||| ||| |||| | ||| || | |||||||||| || Sbjct 868021 AAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCGTGGAG 868080 Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| ||||| || | |||||| |||||||| Sbjct 868081 ATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCA 868113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433367885720