Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14 259 6e-64 seq43 150 2e-31 >seq14 Length=298472 Score = 259 bits (286), Expect = 6e-64 Identities = 1122/1747 (64%), Gaps = 47/1747 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||||||| ||||| ||||||| ||| | | ||||| || || || || || || Sbjct 72713 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 72772 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAA----CACCAACCC 104336 ||||||||||||| || |||||| | | | |||| |||||||| | || || | Sbjct 72773 CTTGGAGACATACAACCTGATGTC---AAGCAAGTTC-TTCACGCATGCTTCCCCCACGC 72828 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 |||||||||| || || || |||||| |||| ||||||| | | | | |||| Sbjct 72829 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 72888 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456 | ||| || | || ||||| | ||||| | | ||||| ||||| ||| || Sbjct 72889 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 72948 Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 104515 |||| |||||||| || | | || | | | || | | ||| || ||| || Sbjct 72949 CTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGG 73006 Query 104516 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || Sbjct 73007 TACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 73066 Query 104575 CTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 ||||| | || | ||| ||| || || | || |||| || ||||| || Sbjct 73067 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 73126 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 73127 GCACTCCGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 73186 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| || || ||| || || ||||| || ||||| ||||||||| | |||||| | Sbjct 73187 TGCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAA 73246 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 || || | ||| | || | || || | || ||||| ||| |||| | || Sbjct 73247 GAACGGTGACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGG 73306 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACG 104869 |||||||| || || || ||| |||||||||| ||| || | | | | || |||| Sbjct 73307 AGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAG-AAGGCGGGCAAGGGTC-GCAAGACG 73364 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | ||| | || | | ||| | || ||||| || | || || ||||| || | || Sbjct 73365 ATCAAGGCT-CAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCC 73423 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 || |||||| ||||| || ||||| |||| |||||||| |||||||| | ||| || Sbjct 73424 ATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCAT 73483 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 | || |||||||| || || ||||| | || | | | || ||| || || Sbjct 73484 CCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCCGT 73543 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGA 105108 || ||||| || || | |||| ||| | | || || | || ||| Sbjct 73544 CTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-----CAACTACGATGAGGCTTGC 73598 Query 105109 TTA----TGAAAAA-CTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | | || || || ||| | || | | ||| | ||||| |||| | Sbjct 73599 TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATC 73658 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 || ||| || ||||| || || ||||| || ||| ||| | ||||| || Sbjct 73659 ATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCC 73718 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGA 105282 |||||||| |||||||||||||| || |||| ||| || || || ||| | || || Sbjct 73719 ATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTCGA 73777 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 ||| ||| || || ||||| || || ||||||||||| |||||||| || || Sbjct 73778 GTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATCTTTGAGACCATTTATCACGCTGCGCT 73837 Query 105343 TGAGGCGA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || || ||| |||| ||| || ||||| || ||||| ||||||| Sbjct 73838 CACTGCCTCCGTGCAGC--TGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCC 73895 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 105460 || || || | || | || || || || |||||| | | || || | || Sbjct 73896 CCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGG 73955 Query 105461 GACTGGGAAGCTCT-CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 |||||||| ||||| | || | | | ||||| | || | ||||||||||| ||| Sbjct 73956 GACTGGGAGGCTCTTCGAG--AGGAAGTCAAGACACACGGCATCCGTAACAGTCTACTCC 74013 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | ||||| ||||| || ||| ||| | || || |||| || || || ||||| || | Sbjct 74014 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGC 74073 Query 105579 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 ||||||| | || ||||| | | | ||||| || ||||| | |||||||| Sbjct 74074 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACC 74133 Query 105639 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698 || | | ||||| || || ||||| |||||| | | ||||||| | | || Sbjct 74134 CCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCA 74193 Query 105699 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758 | | | | |||||||||||| || ||| | || || || | ||| Sbjct 74194 TCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTC 74253 Query 105759 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818 |||| || |||||||| ||| | | ||| | | ||||| || ||||| | Sbjct 74254 TGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGAG 74313 Query 105819 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTC 105876 || ||||||||||| |||| ||| |||| || |||| | || |||||| Sbjct 74314 GTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGG 74371 Query 105877 CAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 105935 |||| || | ||||||| | | || | |||||| || ||||| || || ||||| | Sbjct 74372 CAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATGTACT 74430 Query 105936 ACCTCCG 105942 |||| || Sbjct 74431 ACCTTCG 74437 >seq43 Length=937570 Score = 150 bits (166), Expect = 2e-31 Identities = 208/286 (73%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAA-GCCATCCA 94730 ||||| |||| ||||| ||||| || || ||| | | ||| || ||||| | Sbjct 867879 CTCATCGACACCTATATCAAGGAGCCCGCCCAGC-GAACCTACCTTTTCAACGCCATTGA 867821 Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789 || |||| || || | |||||| || || ||||| || ||| | | | || | Sbjct 867820 GACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAAGATAAGGA 867761 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | | ||||||||| | || ||| | || || || ||||||||||||||||||| || Sbjct 867760 CTC-TTCCTTTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTG 867702 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || ||||| | |||||| |||||||||||||| ||||||||||| ||||| ||||| Sbjct 867701 GTGCCTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCT 867642 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | |||||||| ||||||||||||||||| || ||| || ||||| Sbjct 867641 CTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 867596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259072089880