Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F001705295.1_202016-08-15] 237 sequences; 44,205,264 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq14 242 4e-59 seq60 136 4e-27 >seq14 Length=298472 Score = 242 bits (268), Expect = 4e-59 Identities = 518/764 (68%), Gaps = 26/764 (3%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || | | |||||| ||||| || | ||| ||| ||||| ||| Sbjct 72727 TCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGTCTTGGAGACATACA 72786 Query 53253 ACTTAATGAGCCAA--AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 || | ||| ||| |||| ||| ||||| || | || || || ||||| || || || Sbjct 72787 ACCTGATGT--CAAGCAAGTTCTTCACGCATGCTTCCCCCACGCTCTTCAATGCCGGCAC 72844 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 ||| || || |||| |||||| |||| | |||||||| ||| || || || Sbjct 72845 CCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGACAGTATTGAGGG 72904 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 |||||||| || |||||| |||||| ||||||||| | | |||||||| ||| | Sbjct 72905 AATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCT 72964 Query 53431 CCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCG 53486 | ||| | | | ||||||| | ||| || ||| || || ||||| | ||| Sbjct 72965 GAATGTGCACCGTA--TCCGTGCTACTGGCTCATACATCGCCGGTACCAACGGTACATCG 73022 Query 53487 CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGG 53546 | || |||| |||||||| || |||||||||||||| || ||||| ||| |||||| Sbjct 73023 A--ACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGTATGTCGACCAGG 73080 Query 53547 GTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTA 53606 |||| ||||| || | || ||||||||||||||||| |||||| |||| | Sbjct 73081 GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCCGATGTCT 73140 Query 53607 TGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGT 53666 | ||||| || || || ||| ||| || ||| | || ||| | || ||||||||| | Sbjct 73141 TCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGACCTTT 73200 Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726 | || || ||||| || || || |||||| | || |||||| ||| || ||| Sbjct 73201 TCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACGGTGACTGGA 73260 Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAAC 53785 || |||||||| || |||||||| |||||| | | || |||||| |||||||| | Sbjct 73261 CACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTG-CTACGGAGAGGAGTTCGAG 73319 Query 53786 GAGATGTATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 | |||| | |||| || | |||| ||| |||| | ||||||| Sbjct 73320 GCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGC------AAGACGATCAAGGCT 73373 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| | || || || || |||| ||||| |||| || | |||| | Sbjct 73374 CAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCATTCATGCTC 73433 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 ||||||||| | |||| ||||| ||||| |||||| |||| Sbjct 73434 TACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGG 73477 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||| ||||| | ||| || ||||||||||| ||||||||| |||| || | || Sbjct 74303 TGCTGATCGAGGTGCCTTCATTGATCAGTCCCAGTCACTGAACATCCACATGAAGGACCC 74362 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | ||| |||| | | | ||||||||| || |||||| || |||||||| || Sbjct 74363 CACGATGGGCAAGATCACCAGTATGCACTTTGCAGGCTGGAAGCTTGGCCTCAAGACTGG 74422 Query 55906 TATGTACTATCTGCGGAC 55923 |||||||| || || || Sbjct 74423 CATGTACTACCTTCGTAC 74440 >seq60 Length=448298 Score = 136 bits (150), Expect = 4e-27 Identities = 209/296 (71%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 || |||||||| ||||||||| || |||||||| ||||||||||| || | |||| Sbjct 226586 AGCCGAGTGAAGGTGTAACGAGGACTGGCAGCATCAGATCCACCAGCAAGTCGAGAACCG 226645 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | |||||| || |||| || | |||||| | || |||||||| || |||| | Sbjct 226646 AAGTTTCCACTGGGTTCCAGACAATTGATGTTGTTTGAACCAACAAAGTTCTGGGCCAGG 226705 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 | || || |||||| | ||||| ||||| || || |||||||| | || Sbjct 226706 CCAATGATAGTCTGTTGGAGAGACTGTTCACCGTGGTGGTAGGCAGTCTGCTCAGAGACA 226765 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 || || |||| | | | |||||| |||| ||||| | ||| |||||| |||||||| Sbjct 226766 TAACCAGCCAATTCAACGACCTTCTTGTCTTTGACG--ATGTTTCTCTTGAAGCAGGCAT 226823 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGC 117592 | || ||||| ||||||| ||||| | || ||| ||| ||||| || ||| Sbjct 226824 ATATGACCTTACGCTGACCGGGCTTGAAGCCGTCCAGCACCGAGGGGATGGATCGC 226879 Score = 86.0 bits (94), Expect = 7e-12 Identities = 184/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || |||||| |||| || | ||||| ||||| ||||| || || || | || || Sbjct 226589 CGAGTGAAGGTGTAACGAGGACTGGCAGCATCAGATCCACCAGCAAGTCGAGAACCGAAG 226648 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| ||| || || |||| |||||| | || || || ||||| |||| Sbjct 226649 TTTCCACTGGGTTCCAGACAATTGATGTTGTTTGAACCAACAAAGTTCTGGGCCAGGCCA 226708 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 | || || || ||| | |||||||||||| || || |||||||| | || || Sbjct 226709 ATGATAGTCTGTTGGAGAGACTGTTCACCGTGGTGGTAGGCAGTCTGCTCAGAGACATAA 226768 Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 || ||||| | | |||||| |||| | | ||| |||||| ||||| || || Sbjct 226769 CCAGCCAATTCAACGACCTTCTTGTCTTTGACGATGTTTCTCTTGAAGCAGGCATATATG 226828 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 ||||| ||||| || || || ||||||| ||| Sbjct 226829 ACCTTACGCTGACCGGGCTTGAAGCCGTCCAGCAC 226863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214378872600