Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq21 134 1e-26
seq17 116 3e-21
seq39 104 2e-17
>seq21
Length=1112876
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || ||||| || || |||||||| ||||||| ||||| |||||||
Sbjct 502504 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 502445
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| ||||||| |||||||| || || || ||||||||||||||
Sbjct 502444 AGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 502385
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||| ||||| | ||| | ||| ||
Sbjct 502384 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 502325
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || |||||||||||
Sbjct 502324 CCTGTGAGGGTCTTGACGAAAATCTGCAT 502296
>seq17
Length=1920523
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| ||||| | || | || | ||||| || ||||| || || ||||| || ||||||
Sbjct 1066176 CCACCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTC 1066235
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| ||| || | ||| || |||||| |||| |||||||||||||| || ||
Sbjct 1066236 AGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGGGGA 1066295
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
||||||||||| || ||| || || || | |||| ||||| | ||| |||
Sbjct 1066296 ATGCCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACC 1066355
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | || || || || ||||| || || |||||||||||
Sbjct 1066356 TCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1066402
Score = 107 bits (118), Expect = 2e-18
Identities = 143/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || |||||||||||||| | |||||| ||||| ||||| || ||
Sbjct 1066944 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 1067003
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || | || ||||| ||||| || |||||||||||||| ||| || ||
Sbjct 1067004 GCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 1067063
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | ||| ||||||| ||| | || |||||||| || ||
Sbjct 1067064 ACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTC 1067123
Query 118722 TTTACAAAAATCTGCATGG 118740
|| || || ||||||||||
Sbjct 1067124 TTGACGAAGATCTGCATGG 1067142
Score = 95.1 bits (104), Expect = 1e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| ||||| || || ||||||||||| ||| | ||| || ||||||
Sbjct 1066421 CACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTC 1066480
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| || || ||||| ||||||| ||||| ||||| || || ||||||||||||||
Sbjct 1066481 AAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGAATGCCCTCCTTGTC 1066537
>seq39
Length=918835
Score = 104 bits (114), Expect = 2e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| | ||| || ||||||||| || || |||||| ||||
Sbjct 782437 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 782496
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| ||||| || || || || |||||||||||||| || || || || | |||
Sbjct 782497 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 782556
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||||| | ||||||||||| ||| | || ||||| ||||| || || || |||
Sbjct 782557 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 782616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433775015448700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |