Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq21 105 5e-18 seq17 104 2e-17 seq39 95.1 1e-14 >seq21 Length=1112876 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 502504 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 502445 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || || | ||||| ||||| || || | |||||||||||| Sbjct 502444 AGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 502385 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| |||||||| Sbjct 502384 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 502325 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 || || || ||||| || || || ||||| |||||| Sbjct 502324 CCTGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 502289 >seq17 Length=1920523 Score = 104 bits (114), Expect = 2e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| |||||||||||||||||| || || ||| |||| || | Sbjct 1066933 CAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAA 1066992 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| ||||| || || |||||||| || | |||||||||||| || Sbjct 1066993 GCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 1067052 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | |||| | ||| ||||| | ||| || ||||||| Sbjct 1067053 TCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGC 1067112 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | || || ||||| || ||||| |||||| || Sbjct 1067113 CGGTTAGGGTCTTGACGAAGATCTGCATGGTG 1067144 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||| |||||| |||| |||| | || |||| || || || ||||| Sbjct 1066211 CTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAGCGAA 1066270 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| || || || || | |||||||| ||| ||| || ||| || Sbjct 1066271 GATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTTGCTCTTCACGTT 1066330 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | | ||| ||||| | ||| || ||||| || || ||||||||||| Sbjct 1066331 GTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCAC 1066390 Query 45325 AAAGATTTGCAT 45336 || || ||||| Sbjct 1066391 GAAAATCTGCAT 1066402 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| || ||| |||| |||||||| ||||| || || Sbjct 1066668 TCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAA 1066727 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||||| ||||| ||||| | ||||||||||||| Sbjct 1066728 ATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 1066766 >seq39 Length=918835 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 ||||||| |||||||||||| || | ||| ||| ||| ||||| || || |||| Sbjct 782435 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCG---AGTTGCTTACCAGCGA 782491 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | |||| ||||||||||| || || | |||||||||||| || || ||| || Sbjct 782492 AGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACAT 782551 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | | ||||| ||| ||||| | ||| || |||||||||||||| ||||||| Sbjct 782552 TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCA 782611 Query 45324 CAAA 45327 | || Sbjct 782612 CGAA 782615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395024763094975