Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq129 226 4e-54
seq20 141 1e-28
>seq129
Length=448370
Score = 226 bits (250), Expect = 4e-54
Identities = 565/845 (67%), Gaps = 25/845 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|||||| |||||||||| |||||| |||| ||||| ||||| | || ||| | || ||
Sbjct 390289 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 390230
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | || |||||| ||||| || | ||
Sbjct 390229 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 390170
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||||| | || ||||| || | ||| ||||| || |||||||| || || || || ||
Sbjct 390169 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAG-CG 390111
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGA 125256
|||| | ||| | || || |||| |||| ||| ||||| ||||| |||||||
Sbjct 390110 ATTCAGTGGCGAGGTCCAGATCCCCGAGGC-TCGTTGTTTCTACGGCTTCCAGATCATGA 390052
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315
| |||||| | ||||| || | ||||| || || |||| || || || || |
Sbjct 390051 TGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCG 389992
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
| | ||| | || || ||||| || || || | || | || || || ||||||
Sbjct 389991 CCCAGCGAACCTAC-CTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCT 389933
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| || || |||||| | || | | ||||| | ||| | | || || ||
Sbjct 389932 GACTGGGCCATCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGCT 389873
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| || || ||||| |||||||| ||| || || | || || |||||||||
Sbjct 389872 TTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAAG 389813
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||||| || ||||| | ||||||| | || ||||| ||||||||
Sbjct 389812 AAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGT 389753
Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615
|| ||| |||||||||| || || | ||| | | | || || | ||
Sbjct 389752 CTTCACACTGACTTTGCCTGCCTCCT------CCACTCT---CACCTAAAGGGCCGTGCC 389702
Query 125616 AGCGATGAAAAGGTCATCA--ACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673
||| | | | | | ||| | || | || |||||||| | || ||||| ||||| |
Sbjct 389701 AGCAAGCAGATGAT--TCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCC 389644
Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733
| || || | || || | | | |||||||||| | || ||| ||||||
Sbjct 389643 TCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 389584
Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACG 125790
| ||||| || || |||||||| || || ||||| || ||| | ||||| |
Sbjct 389583 TTGAGTTCGTCGCTGATCGTCTCCTTGTCG---CTCTTGGCAACGAGAAGGTCTACAAGG 389527
Query 125791 CCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCG 125850
||| || ||||| || |||||| | ||| || || | || ||||||||||| ||||
Sbjct 389526 CCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCG 389467
Query 125851 AGAAG 125855
|||||
Sbjct 389466 AGAAG 389462
>seq20
Length=2372104
Score = 141 bits (156), Expect = 1e-28
Identities = 307/450 (68%), Gaps = 12/450 (3%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || ||| | ||| ||||| | || ||||||||| | ||
Sbjct 1579820 CAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCCGAT 1579761
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || | || || ||| || || |||| || ||| | |||
Sbjct 1579760 GTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGAC 1579701
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052
| || ||| || ||| | || ||| | ||||||||||| || || ||||||
Sbjct 1579700 CTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACGGTG-- 1579643
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| || ||||||||| | || || || || |||| |||| || || |||
Sbjct 1579642 -ACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAG 1579584
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGC 97171
|| ||||| |||| |||||| | | |||| | || |||||| || | ||
Sbjct 1579583 TTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGACGA-TCAAGGC 1579525
Query 97172 ACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229
| |||| || ||| | |||| || ||| ||| ||| ||||| |||| || | |||
Sbjct 1579524 TC-AGAAGCTTTGGTACGCCATTCTTGA-GGCCCAGACTGAGACCGGAAACCCATTCATG 1579467
Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289
|||||||||||| || || ||||| || |||||| || | || |||||| ||
Sbjct 1579466 CTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCATCCGAAGC 1579407
Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTAC 97319
|||||||| ||||| |||||| | ||||||
Sbjct 1579406 TCCAATCTTTGCACTGAAATTATCGAGTAC 1579377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740962167561000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |