Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq17 109 5e-19 >seq17 Length=1920523 Score = 109 bits (120), Expect = 5e-19 Identities = 169/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581 |||||| ||| |||||| |||||||||||||||| | | || || ||||||| |||| Sbjct 1066937 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTG-CGGCCGTCCTCAAGCT 1066995 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || |||| || || ||||| || || | | ||||||||| ||| | Sbjct 1066996 GCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCT 1067055 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | || || |||| |||||| ||||| || ||||| || |||| Sbjct 1067056 TGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 1067115 Query 48702 TGAGAGTTTTCACAAAAATCTGCATCGTGTC-TTGATC-GAAGAAAGAGTGATGTG 48755 | || || || || || |||||||| ||| | ||||| | | | ||||||||| Sbjct 1067116 TTAGGGTCTTGACGAAGATCTGCATGGTGGCGGTGATCTGTCGCGAAAGTGATGTG 1067171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421197421360475