Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq17 107 2e-18 >seq17 Length=1920523 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| || ||||| || | |||||| ||||||| ||| ||| |||| ||| Sbjct 1066199 GTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTG 1066258 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || | ||||| | | ||||||||||| ||||| || || || || | ||| || Sbjct 1066259 CTTACCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTT 1066318 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||| ||| | ||| ||||||| || || |||| |||||||| |||||||| Sbjct 1066319 GCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGT 1066378 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| || |||||||| Sbjct 1066379 GAGAGTCTTCACGAAAATCTGCAT 1066402 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| || | ||| || ||||| || | ||| ||||| | |||| | ||||| | Sbjct 1066933 CAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAA 1066992 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| || ||| | || || || | |||||| || || || || || || ||||| | || Sbjct 1066993 GCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 1067052 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || | |||||| | ||| |||||| | || || || | |||||||| || | Sbjct 1067053 TCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGC 1067112 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCATG 95008 | || || || || || |||||||||||| Sbjct 1067113 CGGTTAGGGTCTTGACGAAGATCTGCATG 1067141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448232501871000