Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq17 107 2e-18
>seq17
Length=1920523
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| || ||||| || | |||||| ||||||| ||| ||| |||| |||
Sbjct 1066199 GTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTG 1066258
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| || | ||||| | | ||||||||||| ||||| || || || || | ||| ||
Sbjct 1066259 CTTACCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTT 1066318
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
||| ||| | ||| ||||||| || || |||| |||||||| ||||||||
Sbjct 1066319 GCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGT 1066378
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
||||| ||||| || ||||||||
Sbjct 1066379 GAGAGTCTTCACGAAAATCTGCAT 1066402
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/209 (69%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859
|||| || | ||| || ||||| || | ||| ||||| | |||| | ||||| |
Sbjct 1066933 CAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAA 1066992
Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919
|||| || ||| | || || || | |||||| || || || || || || ||||| | ||
Sbjct 1066993 GCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 1067052
Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979
| || | |||||| | ||| |||||| | || || || | |||||||| || |
Sbjct 1067053 TCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGC 1067112
Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCATG 95008
| || || || || || ||||||||||||
Sbjct 1067113 CGGTTAGGGTCTTGACGAAGATCTGCATG 1067141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448232501871000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |