Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 1e-14 seq39 86.0 5e-12 >seq17 Length=1920523 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | |||||||| | ||||| | ||||||||| | | Sbjct 1066630 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 1066571 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || ||||| ||||| || ||||| || || |||||| Sbjct 1066570 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAA 1066511 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | | ||||||||||| || |||| | ||| | ||| || ||| Sbjct 1066510 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 1066451 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || |||||||| Sbjct 1066450 ATTCAGAAGGAATCTAC 1066434 >seq39 Length=918835 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| |||||| || ||||||||||| | ||||| ||||| ||| Sbjct 782588 ATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 782529 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || || |||||| ||||||| | || || ||||||||||| ||| Sbjct 782528 AAGGAGGGCATTCCCCCGGACCAACAGCGACTGATCTTCGCTGGTAAGCAACTCGAGGAT 782469 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| || ||| || ||||| || || Sbjct 782468 GGCCGAACTCTCTCCGACTACAACATCCAGAA 782437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429881112623625