Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq17 95.1 1e-14
seq39 86.0 5e-12
>seq17
Length=1920523
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || | |||||||| | ||||| | ||||||||| | |
Sbjct 1066630 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 1066571
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||| || | || || ||||| ||||| || ||||| || || ||||||
Sbjct 1066570 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAA 1066511
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| |||| || | | ||||||||||| || |||| | ||| | ||| || |||
Sbjct 1066510 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 1066451
Query 24171 ATTCAAAAAGAATCTAC 24187
||||| || ||||||||
Sbjct 1066450 ATTCAGAAGGAATCTAC 1066434
>seq39
Length=918835
Score = 86.0 bits (94), Expect = 5e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| |||||| || ||||||||||| | ||||| ||||| |||
Sbjct 782588 ATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 782529
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || ||||| || || || |||||| ||||||| | || || ||||||||||| |||
Sbjct 782528 AAGGAGGGCATTCCCCCGGACCAACAGCGACTGATCTTCGCTGGTAAGCAACTCGAGGAT 782469
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178
| | ||| || ||| || ||||| || ||
Sbjct 782468 GGCCGAACTCTCTCCGACTACAACATCCAGAA 782437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429881112623625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |