Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq93 140 2e-28
seq17 109 4e-19
>seq93
Length=7941
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1087 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1146
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1147 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1181
>seq17
Length=1920523
Score = 109 bits (120), Expect = 4e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173
|||||||||| |||||| ||||| ||||||||||| | | || |||| || | ||
Sbjct 1066937 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 1066996
Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233
|| ||||| || || | |||||| || |||| ||||| ||| || |||||| ||| ||
Sbjct 1066997 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 1067056
Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293
||| ||||| | || ||| || | ||||| || | || || || || || ||
Sbjct 1067057 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 1067116
Query 38294 CAAGGTTTTCACGAATATCTGCATG 38318
| ||| || ||||| |||||||||
Sbjct 1067117 TAGGGTCTTGACGAAGATCTGCATG 1067141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334904439279725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |