Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq129 122 2e-22 seq36 107 4e-18 seq49 93.3 9e-14 seq20 93.3 9e-14 >seq129 Length=448370 Score = 122 bits (134), Expect = 2e-22 Identities = 270/403 (67%), Gaps = 8/403 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| |||||||||||||||||||| ||| Sbjct 389466 TCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTG 389525 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||| | |||||| || || | || || || || || ||||| | Sbjct 389526 GCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAGGAGACGATCAGCGACGAACTCAATG 389585 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || |||||||||||||| | | ||| |||| |||||| || | Sbjct 389586 TACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACAGGGAAGAGCCTCAGTGAGG 389645 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798 || |||| ||| ||| || || || | || | | ||| ||| | | | | Sbjct 389646 AACTCCTGTTCAATGGTGACGGCATCAGTGATGATATCTTGAATCATCTGCTTGCTGGCA 389705 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | || || || | |||| ||||| | |||| | ||| ||||||||||| Sbjct 389706 CGGC----CCTTTAGGTGAGAGTGGAGGAGGCAGGCAAAGTCAGTGTGAAGACCCTCGTC 389761 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| ||||| |||||| || | ||| |||||||| | ||||| ||| ||||||| Sbjct 389762 ACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCA 389821 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||| || | | |||| ||| ||| | | |||||| ||| Sbjct 389822 GAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACA 389864 >seq36 Length=1187627 Score = 107 bits (118), Expect = 4e-18 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || ||||| ||||| || || || |||| |||||||| || ||| Sbjct 12264 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 12205 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| |||||||||| | || |||||||| ||||||||| || | Sbjct 12204 CAGACTCATCTCCGTCTCAAGCGTGGTCAGCGTTATGGTCTTTGCGGTCCCAACGGTTCC 12145 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||||||||| |||| ||| | || || || ||||| ||| Sbjct 12144 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTTGAGGGTTTCCCTAA-GCA 12086 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 ||||| | ||| || | || ||||||||| | |||||| Sbjct 12085 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTTGACTCC 12043 Score = 96.9 bits (106), Expect = 7e-15 Identities = 167/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 280152 TCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATC 280211 ||| || ||| || |||| ||||| || ||||| ||||| || |||||||| || ||| Sbjct 11457 TCTCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGCAAGTCTACTCTGATC 11398 Query 280212 AAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATG 280271 || || || || || ||| | ||||| |||| | | |||| ||||| Sbjct 11397 AACGTGCTCACCGGTGAGCTCATCCCCACTCAGGGTGAGATCTACCAGCACGAGAACATC 11338 Query 280272 CGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACT 280331 || || || ||| | |||||||||||| |||||||| |||||||| |||| |||| Sbjct 11337 CGTATCGCCTACATTAAGCAGCACGCTTTCGCTCACATCGATAACCACCTTGACAAGACT 11278 Query 280332 CCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 ||| | | ||||| || ||||| | | || | ||| |||||| ||| | |||| || Sbjct 11277 CCTTCCGAGTACATCCAATGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 11219 >seq49 Length=1060070 Score = 93.3 bits (102), Expect = 9e-14 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| ||||| || || || |||||||||||||||||||| || | || || || || | Sbjct 841958 AGTTGGTTCCCTTTCTGGAGGTTGGAAGATGAAGCTGGCTCTGGCCCGAGCTATGCTCCA 841899 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814 ||||||||| || ||||| || || || || || ||||| | || ||||| | || Sbjct 841898 GCGTGCCGACGTTCTACTTCTGGACGAACCTACTAACCATCTTGATGTTGCCAACATCGC 841839 Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCAC 279872 ||||| | | |||||| | ||||| | || | | |||||||| |||||| Sbjct 841838 TTGGCTCGAGAACTACCT--CAAGTCTCATCCCGATATCACCAGTCTCATTGTTTCTCAC 841781 Query 279873 GACTCTGGCTTCCTAGA 279889 ||||| || ||||| || Sbjct 841780 GACTCCGGATTCCTGGA 841764 >seq20 Length=2372104 Score = 93.3 bits (102), Expect = 9e-14 Identities = 449/699 (64%), Gaps = 15/699 (2%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCAC-TGTCTTCATAG 293173 ||| | |||||| | |||||||| ||||||||||| | | | || || | | || Sbjct 1578561 CTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGACCTGGCG-CTGAG 1578619 Query 293174 AGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCT 293233 |||||||||| ||||| |||| ||||||||||| | | | ||| || |||| Sbjct 1578620 AGATCTCCCAAACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCT 1578679 Query 293234 GGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGA 293292 | || || || | ||||| || |||||||||| | |||||||| || |||| | Sbjct 1578680 GAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATG- 1578738 Query 293293 GCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGA 293352 | | || || || || | | ||||||||| ||||||||||||||||| || Sbjct 1578739 TCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGG 1578798 Query 293353 CGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGCA 293412 || ||| || || || ||| ||| ||| ||| || |||||| | Sbjct 1578799 CGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAG 1578858 Query 293413 GTAGATGCGGTAGGCATAAGAGC-AGTCGTCAGAGAGTTCCTCACACCCT---TCTTGAC 293468 ||| || ||||||||| |||| || || ||| ||| | | || | ||||||| Sbjct 1578859 GTACTGGCAGTAGGCATAGGAGCAAGGAGT-AGACTGTTACGGATGCCGTGTGTCTTGAC 1578917 Query 293469 ACGCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTGA-GGTGTAACACCCCAGAGATGA 293526 | | ||| || |||||| |||||| ||| || || | || ||| | | Sbjct 1578918 TTCCTCTCGAAGAGCCTCCCAGTCCCAGAG--GTCAGAGGGCTTGACGTTCCACATGTCG 1578975 Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586 |||| | ||||||| ||| || || |||| ||||||| | ||| || | ||| Sbjct 1578976 AACTGGAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCC 1579035 Query 293587 TCAGAGAGCTCGCA-AGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACG 293645 | || |||| ||| || || | ||||| |||||| ||| ||||||| Sbjct 1579036 TTAGCCAGCT-GCACGGAGGCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTT 1579094 Query 293646 GTTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTG 293705 ||||||| ||||||| || || || ||||| ||| | ||| |||| Sbjct 1579095 ATTGAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGC 1579154 Query 293706 CAGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGG 293765 |||||||| ||||| | ||||| ||| || | ||| |||| || | ||||| | Sbjct 1579155 AAGACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTG 1579214 Query 293766 AACCGCATATGCCATCACATCAATGCTCCTGTCCAGGTT 293804 || | || ||||||| ||| || ||| |||||| Sbjct 1579215 GACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTT 1579253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027698853059475