Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq129 122 2e-22
seq36 107 4e-18
seq49 93.3 9e-14
seq20 93.3 9e-14
>seq129
Length=448370
Score = 122 bits (134), Expect = 2e-22
Identities = 270/403 (67%), Gaps = 8/403 (2%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| |||||||||||||||||||| |||
Sbjct 389466 TCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTG 389525
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| ||| | |||||| || || | || || || || || ||||| |
Sbjct 389526 GCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAGGAGACGATCAGCGACGAACTCAATG 389585
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || |||||||||||||| | | ||| |||| |||||| || |
Sbjct 389586 TACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACAGGGAAGAGCCTCAGTGAGG 389645
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798
|| |||| ||| ||| || || || | || | | ||| ||| | | | |
Sbjct 389646 AACTCCTGTTCAATGGTGACGGCATCAGTGATGATATCTTGAATCATCTGCTTGCTGGCA 389705
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858
| || || || | |||| ||||| | |||| | ||| |||||||||||
Sbjct 389706 CGGC----CCTTTAGGTGAGAGTGGAGGAGGCAGGCAAAGTCAGTGTGAAGACCCTCGTC 389761
Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918
||| ||||| |||||| || | ||| |||||||| | ||||| ||| |||||||
Sbjct 389762 ACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCA 389821
Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
||| || | | |||| ||| ||| | | |||||| |||
Sbjct 389822 GAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACA 389864
>seq36
Length=1187627
Score = 107 bits (118), Expect = 4e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || ||||| ||||| || || || |||| |||||||| || |||
Sbjct 12264 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 12205
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | ||| |||||||||| | || |||||||| ||||||||| || |
Sbjct 12204 CAGACTCATCTCCGTCTCAAGCGTGGTCAGCGTTATGGTCTTTGCGGTCCCAACGGTTCC 12145
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| |||||| ||||||||||| |||| ||| | || || || ||||| |||
Sbjct 12144 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTTGAGGGTTTCCCTAA-GCA 12086
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566
||||| | ||| || | || ||||||||| | ||||||
Sbjct 12085 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTTGACTCC 12043
Score = 96.9 bits (106), Expect = 7e-15
Identities = 167/240 (70%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 280152 TCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATC 280211
||| || ||| || |||| ||||| || ||||| ||||| || |||||||| || |||
Sbjct 11457 TCTCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGCAAGTCTACTCTGATC 11398
Query 280212 AAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATG 280271
|| || || || || ||| | ||||| |||| | | |||| |||||
Sbjct 11397 AACGTGCTCACCGGTGAGCTCATCCCCACTCAGGGTGAGATCTACCAGCACGAGAACATC 11338
Query 280272 CGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACT 280331
|| || || ||| | |||||||||||| |||||||| |||||||| |||| ||||
Sbjct 11337 CGTATCGCCTACATTAAGCAGCACGCTTTCGCTCACATCGATAACCACCTTGACAAGACT 11278
Query 280332 CCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
||| | | ||||| || ||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 11277 CCTTCCGAGTACATCCAATGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 11219
>seq49
Length=1060070
Score = 93.3 bits (102), Expect = 9e-14
Identities = 140/197 (71%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754
||| ||||| || || || |||||||||||||||||||| || | || || || || |
Sbjct 841958 AGTTGGTTCCCTTTCTGGAGGTTGGAAGATGAAGCTGGCTCTGGCCCGAGCTATGCTCCA 841899
Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814
||||||||| || ||||| || || || || || ||||| | || ||||| | ||
Sbjct 841898 GCGTGCCGACGTTCTACTTCTGGACGAACCTACTAACCATCTTGATGTTGCCAACATCGC 841839
Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCAC 279872
||||| | | |||||| | ||||| | || | | |||||||| ||||||
Sbjct 841838 TTGGCTCGAGAACTACCT--CAAGTCTCATCCCGATATCACCAGTCTCATTGTTTCTCAC 841781
Query 279873 GACTCTGGCTTCCTAGA 279889
||||| || ||||| ||
Sbjct 841780 GACTCCGGATTCCTGGA 841764
>seq20
Length=2372104
Score = 93.3 bits (102), Expect = 9e-14
Identities = 449/699 (64%), Gaps = 15/699 (2%)
Strand=Plus/Plus
Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCAC-TGTCTTCATAG 293173
||| | |||||| | |||||||| ||||||||||| | | | || || | | ||
Sbjct 1578561 CTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACGACCTGGCG-CTGAG 1578619
Query 293174 AGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCT 293233
|||||||||| ||||| |||| ||||||||||| | | | ||| || ||||
Sbjct 1578620 AGATCTCCCAAACAGTCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCT 1578679
Query 293234 GGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGA 293292
| || || || | ||||| || |||||||||| | |||||||| || |||| |
Sbjct 1578680 GAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCACAGACCCATG- 1578738
Query 293293 GCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGA 293352
| | || || || || | | ||||||||| ||||||||||||||||| ||
Sbjct 1578739 TCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGG 1578798
Query 293353 CGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGCA 293412
|| ||| || || || ||| ||| ||| ||| || |||||| |
Sbjct 1578799 CGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAG 1578858
Query 293413 GTAGATGCGGTAGGCATAAGAGC-AGTCGTCAGAGAGTTCCTCACACCCT---TCTTGAC 293468
||| || ||||||||| |||| || || ||| ||| | | || | |||||||
Sbjct 1578859 GTACTGGCAGTAGGCATAGGAGCAAGGAGT-AGACTGTTACGGATGCCGTGTGTCTTGAC 1578917
Query 293469 ACGCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTGA-GGTGTAACACCCCAGAGATGA 293526
| | ||| || |||||| |||||| ||| || || | || ||| | |
Sbjct 1578918 TTCCTCTCGAAGAGCCTCCCAGTCCCAGAG--GTCAGAGGGCTTGACGTTCCACATGTCG 1578975
Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586
|||| | ||||||| ||| || || |||| ||||||| | ||| || | |||
Sbjct 1578976 AACTGGAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCC 1579035
Query 293587 TCAGAGAGCTCGCA-AGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACG 293645
| || |||| ||| || || | ||||| |||||| ||| |||||||
Sbjct 1579036 TTAGCCAGCT-GCACGGAGGCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTT 1579094
Query 293646 GTTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTG 293705
||||||| ||||||| || || || ||||| ||| | ||| ||||
Sbjct 1579095 ATTGAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCGGC 1579154
Query 293706 CAGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGG 293765
|||||||| ||||| | ||||| ||| || | ||| |||| || | ||||| |
Sbjct 1579155 AAGACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTG 1579214
Query 293766 AACCGCATATGCCATCACATCAATGCTCCTGTCCAGGTT 293804
|| | || ||||||| ||| || ||| ||||||
Sbjct 1579215 GACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTT 1579253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027698853059475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |