Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq21 107 2e-18
seq39 89.7 5e-13
seq17 82.4 8e-11
>seq21
Length=1112876
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||||||| || || |||||||| || || || | |
Sbjct 502489 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 502430
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| ||||| || || || || || ||||| ||| || || |
Sbjct 502429 AAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 502370
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| ||||||||||| | || | ||| || || || || || ||
Sbjct 502369 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTG 502310
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 502309 ACGAAAATCTGCAT 502296
>seq39
Length=918835
Score = 89.7 bits (98), Expect = 5e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||| | ||| || ||||||||||| ||||| | |||
Sbjct 782435 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGA 782494
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543
| || |||||||||||||| || || || || ||||| ||| || || | ||||
Sbjct 782495 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG- 782553
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | |||||| | ||||| ||||||| || | || || || ||||| || || ||
Sbjct 782554 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 782613
Query 138604 AAA 138606
|||
Sbjct 782614 AAA 782616
>seq17
Length=1920523
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/198 (70%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
|||||||||| || ||||| |||||||||| || || || || | || ||||| |
Sbjct 1066207 TTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAG 1066266
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
|||| |||||||| || || || || || || || || || ||| | || | ||
Sbjct 1066267 CGAAGATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCC-TGAATCTTGCTCTTC 1066325
Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596
| |||| | | ||||| | ||||| ||||| | || | || || ||||| |||||
Sbjct 1066326 ACGTTGT-CGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGT 1066384
Query 138597 TTTTACAAAAATCTGCAT 138614
|| || |||||||||||
Sbjct 1066385 CTTCACGAAAATCTGCAT 1066402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496197420642000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |