Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4 329 4e-85 seq5 89.7 7e-13 >seq4 Length=1907009 Score = 329 bits (364), Expect = 4e-85 Identities = 991/1529 (65%), Gaps = 27/1529 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || ||||| | | ||| || || || || || || Sbjct 675754 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCGATCTCCTCCTTGGAC 675695 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| |||||| | ||| || || | | |||| || | Sbjct 675694 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 675635 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | |||||| || | Sbjct 675634 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACA 675575 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | |||| ||| | Sbjct 675574 CCACGGGGGGCAGGAGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTG 675515 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || ||||| | || || |||| || || || Sbjct 675514 GTGCGTTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAG 675455 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || |||| | |||| Sbjct 675454 GTGGAGAAGACCTCGGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 675395 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || ||||| || || | || || ||| | |||| Sbjct 675394 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGGGGGGCGACATC---GAGAAGCAGG 675338 Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036 ||| | || || |||| |||| | | || ||||| ||||| Sbjct 675337 ATCTCG------TTGGTGGCCTTGCTGGAGGTGTCACCGGAGAGAATCGCGGCCTGGACG 675284 Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096 | || ||||| || || |||||||||||||| || | || || | || || ||||| Sbjct 675283 GCGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTG 675224 Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156 || || || | | | | || | ||||| || || ||||||||||| | ||| Sbjct 675223 AAGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGAACA 675164 Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216 || || | || || || |||||||| | ||| ||| ||||| || | Sbjct 675163 ATCTCGTGGACGAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGG 675104 Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276 ||| ||||| | ||| || || ||||| ||||| |||||||| ||||| || Sbjct 675103 ATAGTGGATCGGAAAAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTG 675044 Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336 ||||| |||| || ||| | | || ||||| || || | || || || | ||||| Sbjct 675043 TAGAAGTCAATACCCTCGAAGAGAGAGTCAATCTCGATCGAGGTCTGAGCAGAGGAAGAA 674984 Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396 | |||||||| || ||||| || || ||||| | ||| || ||||| || ||| | Sbjct 674983 AGTGTTCGCTTGGCACGCTCGCAAGCAGTTCGGAGACGTCGCAGGGCGCGGACGTTGGTG 674924 Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 | || ||||| || || | || || || | |||||| | || | Sbjct 674923 CTCAAGTCCTTCTTGTGCTTTCTCTTGAATTCATTTACGAAGTGGTTGACCAGACGGTTG 674864 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 674863 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 674804 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || || || ||| Sbjct 674803 TCCTCAATGGTAAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACG 674744 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 674743 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 674684 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || ||||| || ||| ||| || || || || | ||||| || || ||||| || Sbjct 674683 TTGATAATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 674624 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| ||||| Sbjct 674623 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCGAGG 674564 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| | || ||||| || | | Sbjct 674563 TAAGACTCAGCGGTCTCACGCATCTTGGTGAGGATCATAGCAGAGATCTCCTCGGGGGTG 674504 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || || || || || || || || || |||| ||| || | | | Sbjct 674503 AAAGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTTA---CCACCCTTGTCG 674447 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | | ||| | | | | ||||||||| | || |||| ||| | ||||| | Sbjct 674446 ACGATCTTGAAGGGGAAGTGCTTCATATCGGCCTGAACCTCAGCGTCGGCGAACTTGCGA 674387 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| | ||||| || || || || ||||| | ||||||||| || ||||||||| Sbjct 674386 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGGGGGTTCATAGCGACTTGGTTCTTG 674327 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || || || ||||| | || ||||| ||| Sbjct 674326 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 674270 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085 || || || |||||||| || || || || Sbjct 674269 CGGTTACCCTGGTCGTTGGCGATGATATC 674241 >seq5 Length=532633 Score = 89.7 bits (98), Expect = 7e-13 Identities = 167/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || ||| || ||||| || Sbjct 50829 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATGCC 50770 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | ||||| | | || ||||| || ||||||||||| || || ||| || | Sbjct 50769 GTCATCAATAGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTAAACGATGA- 50711 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || || | || | | | |||| || |||||||| |||||||| || || || || || Sbjct 50710 -TTTGTCGC-TCACCATCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTC 50653 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | || || ||| ||| || || ||||| | | ||||| || || || ||||| Sbjct 50652 GTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTAGCCTGTCG 50593 Query 7696 TTG 7698 || Sbjct 50592 CTG 50590 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 50534 CGTTGAAGTAGGCGGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 50475 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| | Sbjct 50474 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 50415 Query 7824 TC 7825 || Sbjct 50414 TC 50413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635049637299000