Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq20 221 1e-52 seq129 150 2e-31 seq3 82.4 9e-11 >seq20 Length=2372104 Score = 221 bits (244), Expect = 1e-52 Identities = 1131/1786 (63%), Gaps = 47/1786 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| ||||||| || | | |||||| || || ||||| || || Sbjct 1580184 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1580125 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||||||||| || |||||| | | |||| || || | || || ||||| Sbjct 1580124 CTTGGAGACATACAACCTGATGTCAAGCAAGTTCTTCACGCATGCTTCCCCCACGCTCTT 1580065 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || || || || |||||| |||| ||| ||| | ||| | ||||| || Sbjct 1580064 CAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGA 1580005 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||||||| |||||| ||||| ||| |||||| Sbjct 1580004 CAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 1579945 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 |||||| || || | | || | || | || | | ||| || | | ||||| Sbjct 1579944 TGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACT--GGCTCATACATCGCCGGTACC 1579887 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || ||| Sbjct 1579886 AACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGTAT 1579827 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| ||| | | || || | || |||| || ||||| ||| Sbjct 1579826 GTCGACCAGGGTGGCAACAAGCGACCC---GGTGCTTTTGCCATCTACCTCGAGCCTTGG 1579770 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||| | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 1579769 CACTCCGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGT 1579710 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 ||| || || ||| || || ||||| || ||||| ||||||||| | |||||| || Sbjct 1579709 GCCCGTGACCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAG 1579650 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | || | ||| | || | || || | || || || ||| |||| | || Sbjct 1579649 AACGGTGACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGGA 1579590 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG-----CGA 112257 |||||||| || || || ||| |||||||||| ||| ||||| | | || Sbjct 1579589 GAGGAGTTCGAGGCTCTGTACGAAAAGTACGAG-----AAGGCGGGCAAGGGTCGCAAGA 1579535 Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 || | | || | || | | ||| | || ||||| || | || || ||||| || | Sbjct 1579534 CGAT-CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAAC 1579476 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 |||| ||||| ||||| || ||||| |||| |||||||| |||||||| | ||| Sbjct 1579475 CCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACC 1579416 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 ||| || ||||| || || || ||||| | || | | | || ||| || Sbjct 1579415 ATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCC 1579356 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 112496 || || ||||| || || | |||| ||| | | || || | || || Sbjct 1579355 GTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCAT-----CAACTACGATGAGGCTT 1579301 Query 112497 -----GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 || | | || || ||| | || | | ||| | ||||| |||| Sbjct 1579300 GCTACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 1579241 Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 | || ||| || ||||| || || ||||| || ||| ||| | ||||| | Sbjct 1579240 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 1579181 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT 112670 | |||||||| ||||| || ||||| || |||| ||| || || || ||| | || Sbjct 1579180 CCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 1579122 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || ||| ||| || || ||||| || || |||||||| || |||||||| || Sbjct 1579121 GAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATCTTTGAGACCATTTATCACGCTGCG 1579062 Query 112731 CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 || || | || |||| ||| || ||||| || ||||| ||||||| Sbjct 1579061 CTCACTGCCTCCGTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCC 1579002 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850 || || || | || | || || || || |||||| | | || || | || Sbjct 1579001 CCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGG 1578942 Query 112851 GACTGGGACGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 |||||||| |||| || || | | | ||||| | || | ||||||||||| | Sbjct 1578941 GACTGGGAGGCTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGTAACAGTCTACTCC 1578884 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || ||||| || ||| ||| | || || |||| || || || ||||| || | Sbjct 1578883 TTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGC 1578824 Query 112969 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 113028 ||||||| | || ||||| | | | ||||| || ||||| | |||||||| Sbjct 1578823 CCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACC 1578764 Query 113029 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 113088 || | | ||||| || || ||||| |||||| | | ||||||| | | || Sbjct 1578763 CCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCA 1578704 Query 113089 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGT 113148 | | | | |||||||||||| || ||| | || || | || | ||| Sbjct 1578703 TCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTC 1578644 Query 113149 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 113208 |||| || |||||||| ||| | | ||| | | ||||| || ||||| | Sbjct 1578643 TGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATCGAG 1578584 Query 113209 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTC 113266 || ||||||||||| |||| ||| |||| | |||| | || |||||| Sbjct 1578583 GTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGG 1578526 Query 113267 CAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATT 113325 |||| || | ||||||| | | || | |||||| || ||||| || || ||||| | Sbjct 1578525 CAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATGTACT 1578467 Query 113326 ACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 113371 |||| || | |||| || || |||||||||| | |||| Sbjct 1578466 ACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 1578421 >seq129 Length=448370 Score = 150 bits (166), Expect = 2e-31 Identities = 208/286 (73%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAA-GCCATCCA 102106 ||||| |||| ||||| ||||| || || ||| | | ||| || ||||| | Sbjct 390019 CTCATCGACACCTATATCAAGGAGCCCGCCCAGC-GAACCTACCTTTTCAACGCCATTGA 389961 Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165 || |||| || || | |||||| || || ||||| || ||| | | | || | Sbjct 389960 GACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATCCGATGGATCCAAGATAAGGA 389901 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | | ||||||||| | || ||| | || || || ||||||||||||||||||| || Sbjct 389900 CTC-TTCCTTTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTG 389842 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || ||||| | |||||| |||||||||||||| ||||||||||| ||||| ||||| Sbjct 389841 GTGCCTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCT 389782 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | |||||||| ||||||||||||||||| || ||| || ||||| Sbjct 389781 CTAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 389736 >seq3 Length=1745038 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 163548 ATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGG 163607 |||| || |||| || ||||| ||||||||| || || || | || || | Sbjct 1152399 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 1152340 Query 163608 GTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACA 163667 |||| || ||| |||| ||| ||| | ||||| ||| | |||||||| ||| || Sbjct 1152339 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 1152280 Query 163668 AAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAG 163717 ||||||||||| ||| ||| || ||||| || ||||||||||| ||| Sbjct 1152279 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAG 1152230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620661121542000