Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq20 244 1e-59 seq42 100 3e-16 seq129 95.1 1e-14 >seq20 Length=2372104 Score = 244 bits (270), Expect = 1e-59 Identities = 1082/1689 (64%), Gaps = 53/1689 (3%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466 ||||| || ||||| || || ||||| ||| |||||| || | || | ||||| | Sbjct 1578460 CGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGT 1578518 Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526 || ||| | || || || ||| | ||||| ||||| |||||||| ||||| Sbjct 1578519 GATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAA 1578578 Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAG 109582 ||| |||||||| ||||| | || || | | ||| | | ||||| |||| Sbjct 1578579 GGCACCTCGATCAGCAGCCATCTGGACGA----CCTGGCGCTGAGAGATCTCCCAAACAG 1578634 Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC--- 109639 |||| |||| | ||||| ||| | || |||| ||||| ||||| || ||| Sbjct 1578635 TCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCT 1578694 Query 109640 CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699 |||| | | || | | |||||| | | ||||| ||||| | | | || | || Sbjct 1578695 CAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCA---TGTCGACAAGGT 1578748 Query 109700 CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGA 109756 | || || | ||||| || || |||||||| || || || |||||| Sbjct 1578749 CCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGA 1578808 Query 109757 TGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTG 109816 | || | |||||||| ||||| ||||| |||||||| || || || | || || | Sbjct 1578809 TATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAG 1578868 Query 109817 TGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCA 109876 | ||||| ||||| | ||| |||||||| |||| || | ||||| || ||| || | Sbjct 1578869 TAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAA 1578928 Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936 || ||||| || | | || | || | | |||||| || || | Sbjct 1578929 GAGCCTCCCAGTCCCAGAGGTCAGAG------GGCTTGACGTTCCACATGTCGAACTGGA 1578982 Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996 | | |||||||| || || ||||||||||| | ||| | ||||| ||| |||| Sbjct 1578983 GAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 1579042 Query 109997 ACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATG 110055 || | | | || | | || || || ||||| || |||||||| || || ||| | Sbjct 1579043 GCT-GCACGGAGGCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAGC 1579101 Query 110056 AGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAGACC 110114 |||| ||| | |||||||| | | || || || || |||| || ||||| Sbjct 1579102 TCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAGACC 1579160 Query 110115 CTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGG 110174 ||||||||| ||||||||||| || || ||||||| | ||||| | || || Sbjct 1579161 CTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGACAGG 1579220 Query 110175 GTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATG 110234 ||| ||| ||||||| | || || || | ||| || ||| | || Sbjct 1579221 GTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTG 1579280 Query 110235 GAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGAGAGCAATAG 110293 || || | | | ||| | | | || | || |||| | ||| |||| | || Sbjct 1579281 CAGCTTCTTGAAGTCGTA-GCAAGCCTCATCGTAGTTGATGAAGGAGGGCAGAGATAGAG 1579339 Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353 | ||||| ||||| || | |||||| | | ||| || | |||||| || || | Sbjct 1579340 AGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAA 1579399 Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413 ||||| || ||| ||| | |||||| || || ||| |||||| ||||||| Sbjct 1579400 GATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCT 1579459 Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CA 110472 | ||||||||| ||||| | || || || ||||| | || |||||||| | ||| | | Sbjct 1579460 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCT 1579519 Query 110473 TCGGCGGCGGGGACAG-TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531 || | | | | | ||||| | | || ||| ||||||||| ||||| | Sbjct 1579520 TCTGAGCCTTGATCGTCTTGCG--ACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGC 1579577 Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 ||| || |||| |||||| || | || || || | ||| || | || | Sbjct 1579578 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGT 1579637 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||| | || || |||||| | ||||||||| || ||||| ||||| | || ||| Sbjct 1579638 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAA 1579697 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 |||||||||| ||| |||| || | ||| ||||| || || || | || || | Sbjct 1579698 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 1579757 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAG------ACAGCGATGGATCCCTTACGACGACC 110765 || ||| |||||||| || ||||| ||| | ||| || || ||| | | || Sbjct 1579758 GACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GTTG-CC 1579814 Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825 |||||| ||||| || || ||| |||||||| | |||||||||| | || | Sbjct 1579815 ACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTT 1579874 Query 110826 GGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCAT 110885 ||| ||| || ||||| || || | | ||||| || ||| | || || Sbjct 1579875 CGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAG 1579934 Query 110886 ACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATAC 110944 |||||||||||| ||| ||| || ||||| ||| |||| ||| | || || | Sbjct 1579935 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT-TGAGAGTATCGTAGATTC 1579993 Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004 | ||||| || |||| | ||| | |||||||| |||| || || |||| | Sbjct 1579994 CCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGG 1580053 Query 111005 TTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTT 111062 | || ||||||||||| || || | ||||| ||| ||| |||| |||||| ||| Sbjct 1580054 TGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTTGACATCAGGTT 1580111 Query 111063 GTATGTGTC 111071 |||||| || Sbjct 1580112 GTATGTCTC 1580120 >seq42 Length=303581 Score = 100 bits (110), Expect = 3e-16 Identities = 306/464 (66%), Gaps = 22/464 (5%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| || ||||| || | | || | || || ||||| | || || || | Sbjct 187693 CGGTCGAACCGCCCTGGTCGCATCAAGGCTTTGTCGAGCATATCCGCTCGATTAGTGCCA 187634 Query 11563 GCAATGACTACAATGCCAG-TCTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 |||| || |||| || | || | | | | ||||||||||||||| ||||||| ||||| Sbjct 187633 GCAAGAACAACAA--CCTGCTCGCGAGTATTGAAACCGTCCATTTCAGTGAGAATCTGGT 187576 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTCTTACCG 11679 | | || ||| |||||||||||| | | || || | |||| | | | | | Sbjct 187575 TCAGAGTTGCTTCCCGCTCATCGTTGCCACCGAATCCC--CGGCCGCTCTCCTGTCGCGC 187518 Query 11680 ACA-------GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 || |||||||||||||| ||||| | ||| || || ||| |||| | | Sbjct 187517 ACGTCCAATTGCGTCAATCTCATCAATGAAGATGATGCAAGGGGCGTTCTTACGTCCTTC 187458 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| | || | ||||| | || ||||| |||||||| |||||||| | | Sbjct 187457 GGCGAACAAATCTCTCACACGTGAAGGACCGACACCGACGAACATTTCAACGAACTCAGA 187398 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | | |||||||| ||| || || |||||| || || |||| || || | | Sbjct 187397 GCCGCTCACACTGAA-GAATGGTACTCCAGACTCGCCGGCTGTGGCCTTGGCAAGTAATG 187339 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---AC 11908 |||| || ||||| || | ||||| | | || || ||||||||||||||||| Sbjct 187338 TCTTGCCAGTACCCGGGGGGCCAGCTAAGATAGCACCTCGGGGGATCTTGGCACCGAGCT 187279 Query 11909 TTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 || | || | ||| |||| ||| |||||| ||||| |||| Sbjct 187278 TTTCGAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTCC 187238 >seq129 Length=448370 Score = 95.1 bits (104), Expect = 1e-14 Identities = 366/559 (65%), Gaps = 16/559 (3%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || || || |||||||||||||| ||| |||| || || Sbjct 389735 GGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACC 389794 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||| || | ||||| ||||| || || | || ||| |||||||| Sbjct 389795 AGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGAT 389854 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670 ||||| ||| |||||||| | ||||| | || ||||| ||| ||| || || Sbjct 389855 ACCCTCAACAGCAGCGAAAGCAACGAGACGTTGGGC-AAAGGAAGAGTCCTTATCTTGGA 389913 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGCTTCG 119729 ||| || ||||||| ||||| | || |||||||| | || | ||||| | | Sbjct 389914 TCCATCGGATGGCCCAGTCAGCCTT-CTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 389972 Query 119730 AAAA-GTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788 |||| || | ||| | || ||||| ||||| | || ||||| |||||||| Sbjct 389973 AAAAGGTAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGT 390031 Query 119789 CTCACCATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847 ||| |||| | | ||| || ||| || | || || | ||||| |||| | Sbjct 390032 CTCGGAGTGAATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGA 390090 Query 119848 TTTGCACTTCGTCAGCAAAATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCA 119906 | || || ||| || | ||| | | | || || || ||||| ||||| || || Sbjct 390091 TCTGGACCTCGCCA-CTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCA 390149 Query 119907 GCGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTC 119963 |||||||| || | ||||| | ||| ||| |||| | | || ||| ||| Sbjct 390150 GCGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTC 390209 Query 119964 CAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCC 120023 ||||||| | ||| || || | ||| | ||| ||||| |||||| || || ||| Sbjct 390210 CAGTCGTGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCC 390269 Query 120024 TTTTTATAGAGTTCCCAAA 120042 || || || | || ||||| Sbjct 390270 TTCTTGTACATTTGCCAAA 390288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588898880955000