Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq20 244 1e-59
seq42 100 3e-16
seq129 95.1 1e-14
>seq20
Length=2372104
Score = 244 bits (270), Expect = 1e-59
Identities = 1082/1689 (64%), Gaps = 53/1689 (3%)
Strand=Plus/Plus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466
||||| || ||||| || || ||||| ||| |||||| || | || | ||||| |
Sbjct 1578460 CGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGT 1578518
Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526
|| ||| | || || || ||| | ||||| ||||| |||||||| |||||
Sbjct 1578519 GATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAA 1578578
Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAA----TTTCCCAGACAG 109582
||| |||||||| ||||| | || || | | ||| | | ||||| ||||
Sbjct 1578579 GGCACCTCGATCAGCAGCCATCTGGACGA----CCTGGCGCTGAGAGATCTCCCAAACAG 1578634
Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC--- 109639
|||| |||| | ||||| ||| | || |||| ||||| ||||| || |||
Sbjct 1578635 TCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCT 1578694
Query 109640 CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699
|||| | | || | | |||||| | | ||||| ||||| | | | || | ||
Sbjct 1578695 CAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCA---TGTCGACAAGGT 1578748
Query 109700 CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGA 109756
| || || | ||||| || || |||||||| || || || ||||||
Sbjct 1578749 CCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGA 1578808
Query 109757 TGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTG 109816
| || | |||||||| ||||| ||||| |||||||| || || || | || || |
Sbjct 1578809 TATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAG 1578868
Query 109817 TGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCA 109876
| ||||| ||||| | ||| |||||||| |||| || | ||||| || ||| || |
Sbjct 1578869 TAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAA 1578928
Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936
|| ||||| || | | || | || | | |||||| || || |
Sbjct 1578929 GAGCCTCCCAGTCCCAGAGGTCAGAG------GGCTTGACGTTCCACATGTCGAACTGGA 1578982
Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996
| | |||||||| || || ||||||||||| | ||| | ||||| ||| ||||
Sbjct 1578983 GAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 1579042
Query 109997 ACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATG 110055
|| | | | || | | || || || ||||| || |||||||| || || ||| |
Sbjct 1579043 GCT-GCACGGAGGCAGTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAGC 1579101
Query 110056 AGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAGACC 110114
|||| ||| | |||||||| | | || || || || |||| || |||||
Sbjct 1579102 TCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCAAGACC 1579160
Query 110115 CTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGG 110174
||||||||| ||||||||||| || || ||||||| | ||||| | || ||
Sbjct 1579161 CTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGGACAGG 1579220
Query 110175 GTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATG 110234
||| ||| ||||||| | || || || | ||| || ||| | ||
Sbjct 1579221 GTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTG 1579280
Query 110235 GAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGAGAGCAATAG 110293
|| || | | | ||| | | | || | || |||| | ||| |||| | ||
Sbjct 1579281 CAGCTTCTTGAAGTCGTA-GCAAGCCTCATCGTAGTTGATGAAGGAGGGCAGAGATAGAG 1579339
Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353
| ||||| ||||| || | |||||| | | ||| || | |||||| || || |
Sbjct 1579340 AGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAA 1579399
Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413
||||| || ||| ||| | |||||| || || ||| |||||| |||||||
Sbjct 1579400 GATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCT 1579459
Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CA 110472
| ||||||||| ||||| | || || || ||||| | || |||||||| | ||| | |
Sbjct 1579460 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCT 1579519
Query 110473 TCGGCGGCGGGGACAG-TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531
|| | | | | | ||||| | | || ||| ||||||||| ||||| |
Sbjct 1579520 TCTGAGCCTTGATCGTCTTGCG--ACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGC 1579577
Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591
||| || |||| |||||| || | || || || | ||| || | || |
Sbjct 1579578 CTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGT 1579637
Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651
||| | || || |||||| | ||||||||| || ||||| ||||| | || |||
Sbjct 1579638 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAA 1579697
Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711
|||||||||| ||| |||| || | ||| ||||| || || || | || || |
Sbjct 1579698 AAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAA 1579757
Query 110712 GATATCCGAGTGCCATGGTTCGAGATAG------ACAGCGATGGATCCCTTACGACGACC 110765
|| ||| |||||||| || ||||| ||| | ||| || || ||| | | ||
Sbjct 1579758 GACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GTTG-CC 1579814
Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825
|||||| ||||| || || ||| |||||||| | |||||||||| | || |
Sbjct 1579815 ACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTT 1579874
Query 110826 GGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCAT 110885
||| ||| || ||||| || || | | ||||| || ||| | || ||
Sbjct 1579875 CGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAG 1579934
Query 110886 ACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATAC 110944
|||||||||||| ||| ||| || ||||| ||| |||| ||| | || || |
Sbjct 1579935 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT-TGAGAGTATCGTAGATTC 1579993
Query 110945 CATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCG 111004
| ||||| || |||| | ||| | |||||||| |||| || || |||| |
Sbjct 1579994 CCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGG 1580053
Query 111005 TTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTT 111062
| || ||||||||||| || || | ||||| ||| ||| |||| |||||| |||
Sbjct 1580054 TGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGA--AGAACTTGCTTGACATCAGGTT 1580111
Query 111063 GTATGTGTC 111071
|||||| ||
Sbjct 1580112 GTATGTCTC 1580120
>seq42
Length=303581
Score = 100 bits (110), Expect = 3e-16
Identities = 306/464 (66%), Gaps = 22/464 (5%)
Strand=Plus/Minus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|| ||||| || ||||| || | | || | || || ||||| | || || || |
Sbjct 187693 CGGTCGAACCGCCCTGGTCGCATCAAGGCTTTGTCGAGCATATCCGCTCGATTAGTGCCA 187634
Query 11563 GCAATGACTACAATGCCAG-TCTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|||| || |||| || | || | | | | ||||||||||||||| ||||||| |||||
Sbjct 187633 GCAAGAACAACAA--CCTGCTCGCGAGTATTGAAACCGTCCATTTCAGTGAGAATCTGGT 187576
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTCTTACCG 11679
| | || ||| |||||||||||| | | || || | |||| | | | | |
Sbjct 187575 TCAGAGTTGCTTCCCGCTCATCGTTGCCACCGAATCCC--CGGCCGCTCTCCTGTCGCGC 187518
Query 11680 ACA-------GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732
|| |||||||||||||| ||||| | ||| || || ||| |||| | |
Sbjct 187517 ACGTCCAATTGCGTCAATCTCATCAATGAAGATGATGCAAGGGGCGTTCTTACGTCCTTC 187458
Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792
|||| | || | ||||| | || ||||| |||||||| |||||||| | |
Sbjct 187457 GGCGAACAAATCTCTCACACGTGAAGGACCGACACCGACGAACATTTCAACGAACTCAGA 187398
Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| | |||||||| ||| || || |||||| || || |||| || || | |
Sbjct 187397 GCCGCTCACACTGAA-GAATGGTACTCCAGACTCGCCGGCTGTGGCCTTGGCAAGTAATG 187339
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---AC 11908
|||| || ||||| || | ||||| | | || || |||||||||||||||||
Sbjct 187338 TCTTGCCAGTACCCGGGGGGCCAGCTAAGATAGCACCTCGGGGGATCTTGGCACCGAGCT 187279
Query 11909 TTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
|| | || | ||| |||| ||| |||||| ||||| ||||
Sbjct 187278 TTTCGAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTCC 187238
>seq129
Length=448370
Score = 95.1 bits (104), Expect = 1e-14
Identities = 366/559 (65%), Gaps = 16/559 (3%)
Strand=Plus/Plus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || ||||| || || || |||||||||||||| ||| |||| || ||
Sbjct 389735 GGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACC 389794
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
||||||||| || | ||||| ||||| || || | || ||| ||||||||
Sbjct 389795 AGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGAT 389854
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670
||||| ||| |||||||| | ||||| | || ||||| ||| ||| || ||
Sbjct 389855 ACCCTCAACAGCAGCGAAAGCAACGAGACGTTGGGC-AAAGGAAGAGTCCTTATCTTGGA 389913
Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGCTTCG 119729
||| || ||||||| ||||| | || |||||||| | || | ||||| | |
Sbjct 389914 TCCATCGGATGGCCCAGTCAGCCTT-CTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 389972
Query 119730 AAAA-GTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788
|||| || | ||| | || ||||| ||||| | || ||||| ||||||||
Sbjct 389973 AAAAGGTAGGTTC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGT 390031
Query 119789 CTCACCATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847
||| |||| | | ||| || ||| || | || || | ||||| |||| |
Sbjct 390032 CTCGGAGTGAATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGA 390090
Query 119848 TTTGCACTTCGTCAGCAAAATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCA 119906
| || || ||| || | ||| | | | || || || ||||| ||||| || ||
Sbjct 390091 TCTGGACCTCGCCA-CTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCA 390149
Query 119907 GCGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTC 119963
|||||||| || | ||||| | ||| ||| |||| | | || ||| |||
Sbjct 390150 GCGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTC 390209
Query 119964 CAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCC 120023
||||||| | ||| || || | ||| | ||| ||||| |||||| || || |||
Sbjct 390210 CAGTCGTGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCC 390269
Query 120024 TTTTTATAGAGTTCCCAAA 120042
|| || || | || |||||
Sbjct 390270 TTCTTGTACATTTGCCAAA 390288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588898880955000
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