Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq20 197 2e-45 seq129 109 6e-19 seq3 87.8 2e-12 >seq20 Length=2372104 Score = 197 bits (218), Expect = 2e-45 Identities = 1135/1783 (64%), Gaps = 57/1783 (3%) Strand=Plus/Plus Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610 |||| | |||||||||| || || |||| | || || |||||||| || ||| Sbjct 1578421 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTC 1578480 Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||| || | ||||| || | || | |||||| | || |||| |||||| || Sbjct 1578481 TTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTC 1578539 Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727 | |||| | |||| ||| |||| | ||||||||| ||| || | || ||| Sbjct 1578540 CTTCATGTGGATGTTCAGTGACTGGGACT--GATCAATGAAGGCACCTCGATCAGCAGCC 1578597 Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787 || | | ||| | | ||| ||||| || || || ||| ||||| ||| Sbjct 1578598 ATCTGGACGACCTGGCGCTGAGAGATCTCCCAAACAGTCTTATACAGAGCCTTGACATCG 1578657 Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844 | ||||| | | || || ||||| ||||| | | || ||| || | | |||| Sbjct 1578658 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 1578714 Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904 ||| | | |||||| ||||| || | || || |||| || |||||||| | Sbjct 1578715 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACC 1578774 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 ||||| || ||||| | | | ||||| || | |||||||| || ||||| Sbjct 1578775 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 1578834 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 || || || |||| || || | ||| ||| || ||||| || || | | |||||| Sbjct 1578835 TCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGTAGACTG 1578894 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTC-CTTGA-GAACATCCCAGTCGTAGTTG--AG 106080 ||||| | || | | ||||| | | | || || || | |||||||| || | || Sbjct 1578895 TTACGGATGCCGTGTGTCTTGA--CTTCCTCTCGAAGAGCCTCCCAGTCCCAGAGGTCAG 1578952 Query 106081 CTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTC 106140 || || || |||| |||| || || || || | || | || | ||| ||||||| Sbjct 1578953 AG-GGCTTGACGTTCC-ACATGTCGAACTGGAGAATACCCTCAGAGGCGGGGGAACCCTT 1579010 Query 106141 AAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGT 106199 || || |||| ||| | | | ||||| | ||| | || || | |||| Sbjct 1579011 GAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTGAGCGCAGCGT 1579069 Query 106200 GATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGT 106259 |||| ||||| |||||||| | ||| | ||| || || || || || | Sbjct 1579070 GATAAATGGTCTCAAAGATCTGCTTATTGAGCTCACGAGCCTCGGGGGACTCGAAGGGCA 1579129 Query 106260 AGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 106318 ||| || | || || |||| || ||||| |||||||| | |||||| |||| ||| Sbjct 1579130 TGCG-CAGAGCAAGGAAAGCATCGGCAAGACCCTGAACACCAAGACCAATGGGTCGGTGG 1579188 Query 106319 CGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTT 106378 ||||| ||| || || || || || || || || || |||| ||| Sbjct 1579189 CGCATGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTC 1579248 Query 106379 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTC 106438 || || |||||| || ||| | || || || | | || | || || | Sbjct 1579249 AGGTTGCGAATAACAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCGTA---GCAAGCC 1579305 Query 106439 TCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495 || || | ||| | || || | | || || | ||||| || || ||| Sbjct 1579306 TCATCGTAGTTGATGAAGGAGGGCAGAGATAGAGAGGCAAGGTTGCAGACGGCGACCTCG 1579365 Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555 || | |||||| | |||||| || || | ||||| || || || || | Sbjct 1579366 TCAGGGGCACAGTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGG 1579425 Query 106556 TTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 106615 ||||||||||||||||| |||||| |||||||||||||||||| | || | || ||| Sbjct 1579426 TTCTTTTGGTTACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTC 1579485 Query 106616 TCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-G 106673 || ||||| | || ||||| || | ||| | | || | | || | || | ||| | Sbjct 1579486 TCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATCGTCTTGCG 1579541 Query 106674 CCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTC 106731 || | ||| || |||||||||| ||| || || || |||||||| || ||| Sbjct 1579542 ACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTC 1579601 Query 106732 GGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCG 106791 || ||| || || || | || || | ||| | ||| | ||| || |||||| || Sbjct 1579602 GGCGAGGCCAGGGCACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACG 1579661 Query 106792 CTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCTCT 106849 |||||||||||| || || ||||| |||| | | ||| || || | ||| || |||| Sbjct 1579662 CTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAA-AGGTCACGGGCACGGA-CCTCC 1579719 Query 106850 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 106909 || | ||| ||||| || | ||||||||||| | || ||| | |||||| ||||| Sbjct 1579720 TCCTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCG 1579779 Query 106910 AGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTG 106966 || |||| || | || || ||| ||| | || | ||||| || || ||| Sbjct 1579780 AGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTG 1579839 Query 106967 GCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-A 107024 ||| || || |||||||| |||| | ||| | ||| ||| || || || ||| Sbjct 1579840 TTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATG 1579899 Query 107025 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 107084 || ||| | | || | | | || | | || |||||||| |||||| ||| | Sbjct 1579900 TATGAG--CCAGTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGG 1579957 Query 107085 AGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGG 107144 |||| ||||| | | ||||| | ||||| || | || ||| ||||| | Sbjct 1579958 AGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATAT 1580017 Query 107145 CGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG 107204 | | | ||||||| |||| || || || || || ||||||||||| || || | Sbjct 1580018 CAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGG 1580077 Query 107205 ----TTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260 |||||||| |||| | | | |||||| || ||||||||||||||| || Sbjct 1580078 AAGCATGCGTGAA-GAACTTGCTT---GACATCAGGTTGTATGTCTCCAAGACTCGCTCG 1580133 Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || || || || ||| || | | ||||||||| | ||||| Sbjct 1580134 ATATCATCACCCCAGATACCAACAGACACACGCATGATCATGT 1580176 >seq129 Length=448370 Score = 109 bits (120), Expect = 6e-19 Identities = 300/457 (66%), Gaps = 16/457 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| || ||||| ||||||||||| Sbjct 389448 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 389507 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | || || | | | | || |||| |||| Sbjct 389508 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 389562 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || |||||||||||| ||| ||||||||||| |||| || Sbjct 389563 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGG 389622 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| || || || || || |||| | | ||||| || || || | | ||| Sbjct 389623 CACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATAT 389682 Query 117221 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | || || | | | ||| | | || | || | || ||| || ||||| Sbjct 389683 CTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAA 389739 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| |||||||| || || || || || || || |||||| || || |||| Sbjct 389740 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCA 389799 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 ||||||| |||||||| | ||| |||||| | ||| | || |||||||||||||| Sbjct 389800 TGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCT 389859 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 | ||| || || |||| || || | ||| ||||| Sbjct 389860 CAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGA 389896 >seq3 Length=1745038 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || ||||| ||||||||| |||||| ||| | || || | Sbjct 1152399 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 1152340 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| || ||| | ||||| ||| | |||||||| || || Sbjct 1152339 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 1152280 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||||||||||| ||| | || || ||||| || |||||||| || |||||| Sbjct 1152279 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 1152227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589903549389000