Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq17 104 2e-17
>seq17
Length=1920523
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||||||||| ||| | || |||| |||| ||| || || || ||
Sbjct 1066212 TCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAG 1066271
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| | || | |||||||| || |||||| || |||
Sbjct 1066272 ATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTTGCTCTTCACGTTG 1066331
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | |||| | |||||| || | ||| ||||| ||||| ||||||||||||||
Sbjct 1066332 TCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACG 1066391
Query 34971 AAGATCTGCATA 34982
|| |||||||||
Sbjct 1066392 AAAATCTGCATA 1066403
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| || || || || | || | || || ||||| || ||||| ||
Sbjct 1066950 TCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAA 1067009
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | ||||||||||| | || | ||||||||||| |||||| ||||| ||
Sbjct 1067010 ATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGAC--AT 1067067
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || | |||||| |||| ||| ||||| || || || || |||||
Sbjct 1067068 --TGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTT 1067125
Query 34967 CACAAAGATCTGCAT 34981
|| |||||||||||
Sbjct 1067126 GACGAAGATCTGCAT 1067140
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/198 (70%), Gaps = 10/198 (5%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||||||||| ||||| ||||| |||| |||| || || || || || |||||
Sbjct 1066439 TTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAA 1066498
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT-CTGTT----TG 34904
|| ||||| || || || | || | ||||||||||| ||||| || || |
Sbjct 1066499 GATGAGTCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATT 1066558
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
| ||| ||||| | | ||| || || | || ||||| ||||| || || |||
Sbjct 1066559 ATCAATGGTATCGGAT-----GACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTC 1066613
Query 34965 TTCACAAAGATCTGCATA 34982
|| || ||||| ||||||
Sbjct 1066614 TTGACGAAGATTTGCATA 1066631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324592155955800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |