Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq17 104 2e-17 >seq17 Length=1920523 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||||||||| ||| | || |||| |||| ||| || || || || Sbjct 1066212 TCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAG 1066271 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| ||| | || | |||||||| || |||||| || ||| Sbjct 1066272 ATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTTGCTCTTCACGTTG 1066331 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| | |||||| || | ||| ||||| ||||| |||||||||||||| Sbjct 1066332 TCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACG 1066391 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 1066392 AAAATCTGCATA 1066403 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || || || || | || | || || ||||| || ||||| || Sbjct 1066950 TCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAA 1067009 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||||||||||| | || | ||||||||||| |||||| ||||| || Sbjct 1067010 ATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGAC--AT 1067067 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | |||||| |||| ||| ||||| || || || || ||||| Sbjct 1067068 --TGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTT 1067125 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 1067126 GACGAAGATCTGCAT 1067140 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/198 (70%), Gaps = 10/198 (5%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||| ||||| |||| |||| || || || || || ||||| Sbjct 1066439 TTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAA 1066498 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT-CTGTT----TG 34904 || ||||| || || || | || | ||||||||||| ||||| || || | Sbjct 1066499 GATGAGTCGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATT 1066558 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 | ||| ||||| | | ||| || || | || ||||| ||||| || || ||| Sbjct 1066559 ATCAATGGTATCGGAT-----GACTCGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTC 1066613 Query 34965 TTCACAAAGATCTGCATA 34982 || || ||||| |||||| Sbjct 1066614 TTGACGAAGATTTGCATA 1066631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324592155955800