Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq129 105 8e-18
>seq129
Length=448370
Score = 105 bits (116), Expect = 8e-18
Identities = 270/411 (66%), Gaps = 0/411 (0%)
Strand=Plus/Plus
Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020
|| ||||| ||| || || |||||||| | | || | || ||||| || || | |
Sbjct 389733 CAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGA 389792
Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080
|||||||| || || | || || | |||||| ||||| || || | ||| |||||
Sbjct 389793 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAG 389852
Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140
||||| || || || || |||||||| || | || || | || || |||| ||
Sbjct 389853 ATACCCTCAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTGG 389912
Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200
|||||| | ||||| |||||||||||| | || || || ||||| || | ||
Sbjct 389913 ATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 389972
Query 19201 AATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260
|| || || | |||| | | || || | ||| | || || | | ||| |
Sbjct 389973 AAAAGGTAGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTC 390032
Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320
|| || ||||| || || || ||||| || ||||| ||||| | || || | |||
Sbjct 390033 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATC 390092
Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371
|| || || | || |||| ||||| | || || || || || ||||||
Sbjct 390093 TGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCA 390143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562035198879000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |