Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq20 230 4e-55
seq129 165 2e-35
>seq20
Length=2372104
Score = 230 bits (254), Expect = 4e-55
Identities = 808/1235 (65%), Gaps = 69/1235 (6%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| || |||||||| || ||||||||||||||| ||| ||||| ||| | ||||||||
Sbjct 1579057 GTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAG-CTCACGAGCCTCGGG 1579115
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
|| ||||||||| ||||| | | ||||| | ||||| || ||||| || || | |
Sbjct 1579116 GGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCGGCAAGACCCTGAACACCAAGA 1579173
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| ||||| | ||| | | |||| | ||| | || |||| || || || ||| |
Sbjct 1579174 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGG-ACAGGGTAGTGGTTCA 1579231
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651
| ||||| | ||||| ||||| || | | || | | |||| | |||||||| |
Sbjct 1579232 CATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAGCTTCTTGA 1579291
Query 221652 GATTGAACACCAACTCGCCGC--CGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709
| | | ||| ||| | ||| || || | ||| ||||||
Sbjct 1579292 AGTCGTAG--CAA---GCCTCATCGTAGTTGATG----------AAGG----AGGGCAGA 1579332
Query 221710 GCT-----GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCT 221764
| | ||| ||||| || ||||| |||||||| | |||| || || ||
Sbjct 1579333 GATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCA 1579392
Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824
|| || || ||| || |||||| || |||| || || ||| |||||| |||
Sbjct 1579393 GTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAG 1579452
Query 221825 GCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCC 221884
|| |||||||||||||| || || || ||||| ||| ||| | ||||| || |
Sbjct 1579453 GCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 1579512
Query 221885 CAGAGTTCTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATA 221937
|| || | |||| || | | |||| | |||| | || |||| |||||| ||
Sbjct 1579513 CAAAGCT-TCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTA 1579571
Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC 221997
| ||||| | | |||| || ||||| ||| | ||||| || |||
Sbjct 1579572 C-------AGAGCCT--CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATT 1579622
Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057
||| ||||| || |||||| ||| | | || | || |||||| || || |||||
Sbjct 1579623 GGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGAT 1579682
Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117
||| || || | || || || | || || ||||||| |||| ||| || | ||
Sbjct 1579683 CCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAG 1579742
Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177
||| | ||||| || | || | |||||| ||||| || |||| ||| | ||| |||||
Sbjct 1579743 ATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGG 1579802
Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCG 222236
|||||||||||||||||| || | ||| | ||| | |||||||| ||||| | |
Sbjct 1579803 TCGCTTGTTGCCACCCTGGTCGA-CATACCGAGCAGTGTTGTTGAAGACACGAAGCATAG 1579861
Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296
| || | ||||| ||| ||||||||| || ||||| | || || | ||
Sbjct 1579862 GAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC---GGA 1579918
Query 222297 TACTG-GCAGA--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGA 222353
||| | ||| | || || |||||||| || || ||||||||||| ||| ||||||
Sbjct 1579919 TACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGA 1579978
Query 222354 GAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACA 222413
|||| || ||| ||||| ||| ||| ||||| | | | || || ||||| ||||
Sbjct 1579979 GAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACA 1580038
Query 222414 TCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCC 222473
|| | | | || | ||| || || |||||||| || || || ||| | |
Sbjct 1580039 ATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGC 1580098
Query 222474 TAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCAT 222531
| |||||||| | ||| ||||| | ||||| |||| | || ||| || | | ||
Sbjct 1580099 TTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA- 1580157
Query 222532 GGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGC 222589
| | || | |||| ||||| ||| || | ||| ||| || | | || |||
Sbjct 1580158 GACACA-CGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATCT--TGAGG 1580214
Query 222590 AGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624
||||| ||| |||| ||||||||| ||||||||
Sbjct 1580215 AGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 1580249
>seq129
Length=448370
Score = 165 bits (182), Expect = 2e-35
Identities = 381/571 (67%), Gaps = 11/571 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | ||||||||||||||| | || |||||| || || |||||||| ||
Sbjct 390289 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 390230
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
||||||| | ||| |||| || || || | || |||||| || ||
Sbjct 390229 TCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTGCCGATGAGCAGTTCTTCGTCTC 390171
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | | || ||||| || |||||||||||||| || |||||||| || |||| |
Sbjct 390170 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 390111
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
||||| | || || ||| | ||||| ||||||||||| |||||||| ||
Sbjct 390110 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 390051
Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769
|| || | ||||| ||| || || || || || || || || | ||
Sbjct 390050 GGAGAACATTCACTCCGAGACCTACTCC---CTCCTCATCGACACCTATATCAAGGAGCC 389994
Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
|||| || || || || ||||| ||| ||| ||| ||||| | ||||||
Sbjct 389993 CGCCCAGCGAACCTACCTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGC 389934
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889
|||||||| |||||| | || | || | |||| | | || || || ||
Sbjct 389933 TGACTGGGCCATCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGC 389874
Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949
|| |||||||| ||||| ||||| ||||| ||| | || || | || |||||||||||
Sbjct 389873 TTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAA 389814
Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009
| || || |||||| || ||| ||| || |||||||||||| | ||||||||
Sbjct 389813 GAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGG 389754
Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040
||| |||| || ||||||||||| ||| ||
Sbjct 389753 TCTTCACACTGACTTTGCCTGCCTCCTCCAC 389723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928723179384000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |