Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq20 230 4e-55 seq129 165 2e-35 >seq20 Length=2372104 Score = 230 bits (254), Expect = 4e-55 Identities = 808/1235 (65%), Gaps = 69/1235 (6%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || || |||||||| || ||||||||||||||| ||| ||||| ||| | |||||||| Sbjct 1579057 GTGAGCGCAGCGTGATAAATGGTCTCAAAGATCTGCTTATTGAG-CTCACGAGCCTCGGG 1579115 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 || ||||||||| ||||| | | ||||| | ||||| || ||||| || || | | Sbjct 1579116 GGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCGGCAAGACCCTGAACACCAAGA 1579173 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 || ||||| | ||| | | |||| | ||| | || |||| || || || ||| | Sbjct 1579174 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGG-ACAGGGTAGTGGTTCA 1579231 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||| ||||| || | | || | | |||| | |||||||| | Sbjct 1579232 CATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTGTGCAGCTTCTTGA 1579291 Query 221652 GATTGAACACCAACTCGCCGC--CGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709 | | | ||| ||| | ||| || || | ||| |||||| Sbjct 1579292 AGTCGTAG--CAA---GCCTCATCGTAGTTGATG----------AAGG----AGGGCAGA 1579332 Query 221710 GCT-----GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCT 221764 | | ||| ||||| || ||||| |||||||| | |||| || || || Sbjct 1579333 GATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCA 1579392 Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824 || || || ||| || |||||| || |||| || || ||| |||||| ||| Sbjct 1579393 GTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTACTCTTGCGGTTGCAG 1579452 Query 221825 GCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCC 221884 || |||||||||||||| || || || ||||| ||| ||| | ||||| || | Sbjct 1579453 GCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 1579512 Query 221885 CAGAGTTCTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATA 221937 || || | |||| || | | |||| | |||| | || |||| |||||| || Sbjct 1579513 CAAAGCT-TCTGAGCCTTGATCGTCTTGCGACCCTTGCCCGCCTTCTCGTACTTTTCGTA 1579571 Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC 221997 | ||||| | | |||| || ||||| ||| | ||||| || ||| Sbjct 1579572 C-------AGAGCCT--CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCATT 1579622 Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 ||| ||||| || |||||| ||| | | || | || |||||| || || ||||| Sbjct 1579623 GGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGAT 1579682 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 ||| || || | || || || | || || ||||||| |||| ||| || | || Sbjct 1579683 CCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAG 1579742 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 ||| | ||||| || | || | |||||| ||||| || |||| ||| | ||| ||||| Sbjct 1579743 ATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGG 1579802 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCG 222236 |||||||||||||||||| || | ||| | ||| | |||||||| ||||| | | Sbjct 1579803 TCGCTTGTTGCCACCCTGGTCGA-CATACCGAGCAGTGTTGTTGAAGACACGAAGCATAG 1579861 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | || | ||||| ||| ||||||||| || ||||| | || || | || Sbjct 1579862 GAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC---GGA 1579918 Query 222297 TACTG-GCAGA--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGA 222353 ||| | ||| | || || |||||||| || || ||||||||||| ||| |||||| Sbjct 1579919 TACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGA 1579978 Query 222354 GAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACA 222413 |||| || ||| ||||| ||| ||| ||||| | | | || || ||||| |||| Sbjct 1579979 GAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACA 1580038 Query 222414 TCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCC 222473 || | | | || | ||| || || |||||||| || || || ||| | | Sbjct 1580039 ATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGC 1580098 Query 222474 TAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCAT 222531 | |||||||| | ||| ||||| | ||||| |||| | || ||| || | | || Sbjct 1580099 TTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA- 1580157 Query 222532 GGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGC 222589 | | || | |||| ||||| ||| || | ||| ||| || | | || ||| Sbjct 1580158 GACACA-CGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTCAATCT--TGAGG 1580214 Query 222590 AGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624 ||||| ||| |||| ||||||||| |||||||| Sbjct 1580215 AGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 1580249 >seq129 Length=448370 Score = 165 bits (182), Expect = 2e-35 Identities = 381/571 (67%), Gaps = 11/571 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||| | || |||||| || || |||||||| || Sbjct 390289 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 390230 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | ||| |||| || || || | || |||||| || || Sbjct 390229 TCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTGCCGATGAGCAGTTCTTCGTCTC 390171 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || ||||| || |||||||||||||| || |||||||| || |||| | Sbjct 390170 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 390111 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||||| | || || ||| | ||||| ||||||||||| |||||||| || Sbjct 390110 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 390051 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| || || || || || || || || | || Sbjct 390050 GGAGAACATTCACTCCGAGACCTACTCC---CTCCTCATCGACACCTATATCAAGGAGCC 389994 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 |||| || || || || ||||| ||| ||| ||| ||||| | |||||| Sbjct 389993 CGCCCAGCGAACCTACCTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGC 389934 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||||| |||||| | || | || | |||| | | || || || || Sbjct 389933 TGACTGGGCCATCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGC 389874 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 || |||||||| ||||| ||||| ||||| ||| | || || | || ||||||||||| Sbjct 389873 TTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAA 389814 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||||| || ||| ||| || |||||||||||| | |||||||| Sbjct 389813 GAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGG 389754 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||| |||| || ||||||||||| ||| || Sbjct 389753 TCTTCACACTGACTTTGCCTGCCTCCTCCAC 389723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928723179384000