Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq17 120 2e-21
>seq17
Length=1920523
Score = 120 bits (132), Expect = 2e-21
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| || || || || ||| ||| || || || || || | |||||
Sbjct 1066409 ACGAAGACGGAGCACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGT 1066468
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | ||| ||||||||||| |||||||| || || || |||||||| || ||||| ||
Sbjct 1066469 TCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGAATGCC 1066528
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||||| || ||||| || ||| ||||| ||||| | || | | ||| |
Sbjct 1066529 CTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGA-CTTCCA 1066587
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| || || || || || ||||| ||||| |||||
Sbjct 1066588 GAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTG 1066627
Score = 93.3 bits (102), Expect = 3e-13
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||| || |||||||| ||| ||| || | || || || || || ||
Sbjct 1066637 ACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGT 1066696
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| ||||| |||||||||||||||||||| || || || || |||||||| || ||
Sbjct 1066697 TCGACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATACC 1066756
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||||| || ||||| || ||| || || ||||| | | | | ||||
Sbjct 1066757 CTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCGA-CCTCAA 1066815
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762
| || || || || || ||||| ||||| ||||
Sbjct 1066816 GAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 1066848
Score = 93.3 bits (102), Expect = 3e-13
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| || ||||| ||||||||||| || || || || || ||||||| |||||
Sbjct 1066919 ACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGT 1066978
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | || ||||| ||||| || || ||||| | ||||| || || || || || ||
Sbjct 1066979 GCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCC 1067038
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||||| |||||||| |||||| || ||||| || | | | || || |
Sbjct 1067039 CTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAA-CCTCGA 1067097
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||| || || || ||||| || ||||| ||||| || ||
Sbjct 1067098 GGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTG 1067137
Score = 91.5 bits (100), Expect = 1e-12
Identities = 114/154 (74%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| | ||||| ||||| || |||||||| || ||||| || ||||| || |||||
Sbjct 1066247 ATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTT 1066306
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAAGGGTAA 480735
|| |||||||| || || || ||||| ||| | | | || | ||||||| |
Sbjct 1066307 ATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCT-CAAGGGTGA 1066365
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || ||||||||||| |||||||| ||
Sbjct 1066366 TGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTG 1066399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267729876425300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |