Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq20 223 4e-53 seq129 109 7e-19 seq3 87.8 2e-12 >seq20 Length=2372104 Score = 223 bits (246), Expect = 4e-53 Identities = 1141/1782 (64%), Gaps = 53/1782 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 1580184 CCCACAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 1580125 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAA----CACCAACCC 75326 ||||||||||||| || |||||| | | | |||| |||||||| | || || | Sbjct 1580124 CTTGGAGACATACAACCTGATGTC---AAGCAAGTTC-TTCACGCATGCTTCCCCCACGC 1580069 Query 75327 TCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGG 75386 |||||||||| || || || || || |||| ||||||| | | | | |||| Sbjct 1580068 TCTTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGG 1580009 Query 75387 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 75446 | ||| || | || ||||| | ||||| | | ||||| ||||| ||| || Sbjct 1580008 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 1579949 Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG 75505 |||| |||||||| || | | || | | | || | | ||| || ||| || Sbjct 1579948 CTGGTGGTATTGGTCTGAATGTGCACCGTATCCGTGCTACTGG--CTCATACATCGCCGG 1579891 Query 75506 -ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || ||| ||| | ||| | |||| |||||||| || || ||| ||| || || Sbjct 1579890 TACCAACGGTACATCGAACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1579831 Query 75565 CTATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCAT 75620 ||||| | || | | ||| | || | ||| | | || ||||| | || || | Sbjct 1579830 GTATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTT 1579772 Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680 |||| ||||| || | ||||||||||| | || ||||| ||| | || |||| || Sbjct 1579771 GGCACTCCGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGG-TC 1579713 Query 75681 GGTGTA-GAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 ||| | || || ||| | | |||| ||||| || || |||||||||||||| ||||| Sbjct 1579712 CGTGCCCGTGACCT-TTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGA 1579654 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 | || ||| | ||| | ||| | || || | || || || ||| ||||| Sbjct 1579653 GAAGAACGGTGACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTA 1579594 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGC 75855 || |||||||| || || || ||| |||||| || ||| ||| | | ||| | Sbjct 1579593 CGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGAC 1579534 Query 75856 GACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 || | || | | || | ||||| | || ||||| | | ||||| ||||| |||| Sbjct 1579533 GAT----CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAA 1579478 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 |||| ||||| ||||||||||| || ||| ||||||||||||||||| | || | Sbjct 1579477 ACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTA 1579418 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | ||| ||||| ||||||||||| |||||| | |||||| | || ||| | Sbjct 1579417 CCATCCGAAGCTCCAATCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCG 1579358 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCA 76091 | || ||||| | || || | | || || | ||| | || ||| || || Sbjct 1579357 CCGTCTGCAACCTTGCCTCTCTATCTCTGCCCTCCTTCATCAACTACGATGAGGCTTGC- 1579299 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | || | | || || || | ||| || |||||| || || ||| Sbjct 1579298 --TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 1579241 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| || || || || || || || || || ||| ||||| ||| ||| Sbjct 1579240 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 1579181 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT 76270 | |||||| | |||||||| ||||| || |||| || || | || ||| | || Sbjct 1579180 CCATTGGTCTTGGTGTTCAGGGTCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTC 1579122 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || || || || ||| | ||| | |||||||| ||||| |||||||| | Sbjct 1579121 GAGTCCCCCGAGGCTCGTGAGCTCAATAAGCAGATCTTTGAGACCATTTATCACGCTGCG 1579062 Query 76331 CTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 || || ||| | ||||| | | | ||| |||| || || ||||||| Sbjct 1579061 CTCACTGC-CTCCGTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTC 1579003 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAAC 76447 ||||| || | || | || ||||| || |||| |||| || || || || | | Sbjct 1579002 CCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAACGTCAAGCC-CTCTGACCTC 1578945 Query 76448 TACGACTGGGATGTTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | |||||||| | || || || | | | ||||| | || | ||||||||||| Sbjct 1578944 TGGGACTGGGAGGCTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGTAACAGTCTAC 1578887 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | | || || ||||| || ||| ||| | || || |||| || || || ||||| | Sbjct 1578886 TCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCG 1578827 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | || ||||| | || ||||||| | | ||||| |||||||| |||||| Sbjct 1578826 AGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCA 1578767 Query 76626 ACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685 || || |||| ||||| | || ||||| |||||| | | ||||||| | | Sbjct 1578766 ACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACC 1578707 Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745 ||| | | | |||||||||||| || || | | ||||| | ||| ||||| Sbjct 1578706 GCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGG 1578647 Query 76746 ATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATC 76805 ||| || || || ||||| ||| | | ||| | | ||||| || |||| Sbjct 1578646 CTCTGTATAAGACTGTTTGGGAGATCTCTCAGCGCCAGGTCGTCCAGATGGCTGCTGATC 1578587 Query 76806 GTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGAT 76863 | ||| ||||||||||| |||| ||| |||| | |||| | || ||||| Sbjct 1578586 GAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGAT 1578529 Query 76864 GTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGT 76922 | |||| || | |||||| | || | || ||||| | || ||||| || || |||| Sbjct 1578528 GGGCAAGATCACCAGTATGCACTTTGCAGGC-TGGAAGCTTGGCCTCAAGACTGGCATGT 1578470 Query 76923 ACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 |||| || || || |||| || || |||||||||| Sbjct 1578469 ACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 1578428 >seq129 Length=448370 Score = 109 bits (120), Expect = 7e-19 Identities = 300/457 (66%), Gaps = 16/457 (4%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||| ||| | || || |||| || || ||| ||||||||||||||| || | Sbjct 389896 TCCTTTGCCCAACGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCC 389837 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | |||||| ||| | |||||||| ||||||||||| || || |||||| || Sbjct 389836 TTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAAC 389777 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247 || || || || || || |||||||| ||| || |||||| || ||| || | || Sbjct 389776 GAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCT 389720 Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304 | || | | ||| | | | || || | ||| | | || || || Sbjct 389719 CACCTAAAGGGCCGTGCCAGCAAGCAGATGATTCAAGATATCATCACTGATGCCGTCACC 389660 Query 65305 ATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAG 65364 ||||| | | |||| || || || || || ||| || |||| ||||||||||| Sbjct 389659 ATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGAC 389600 Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCA 65424 ||| |||||||||||| || | ||||||||||| |||| || Sbjct 389599 CTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CA 389545 Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 | | | | || || | || || || ||||| ||||||||||| ||||| | Sbjct 389544 ACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCG 389485 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | |||||||||||||| |||||||| |||| ||||| Sbjct 389484 GCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTA 389448 >seq3 Length=1745038 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || || | ||| ||||||||||| || Sbjct 1152227 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 1152286 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||| | ||| || |||| ||| || ||||| || || Sbjct 1152287 ATGGTTGAAGAGCAGGACCTTGACCTGACCGCGGTAATCGGCATCGATGACACCAGCGCC 1152346 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||||||||| ||||| || |||| || |||| Sbjct 1152347 TGTGTCAATGAAATGCTTGGAAGCGAGACCCGATCGAGGGGCAATGCGTCCAT 1152399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596491486668000