Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq17 102 7e-17 >seq17 Length=1920523 Score = 102 bits (112), Expect = 7e-17 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || |||||||| || || || || ||||| || || | Sbjct 1067143 ACCATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCT 1067084 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || ||||| || ||||| || || || || ||||| Sbjct 1067083 TCCGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGAC 1067024 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || ||||| ||||| || ||||| || ||||| ||||| | | | || ||||| Sbjct 1067023 CAGCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTAC 1066964 Query 24881 AACATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||||| ||||| || || || || |||| Sbjct 1066963 AACATTCAGAAGGAGTCCACTCTTCATCTTG 1066933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449838691533000