Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq129 127 3e-23
seq20 118 2e-20
seq26 105 1e-16
>seq129
Length=448370
Score = 127 bits (140), Expect = 3e-23
Identities = 228/328 (70%), Gaps = 5/328 (2%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | ||||| ||| || || |||||||| || |||||
Sbjct 389753 ACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTT 389812
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| || || | ||| || ||| ||||| ||||| || || || ||
Sbjct 389813 CTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCGAA 389872
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| ||||| || | |||||| | || || | | | | |||||| || |||||
Sbjct 389873 AGCAACGAGACGTTGGGCAAAGGAAG--AGTCCTTATCT-TGGATCCATCGGATGGCCCA 389929
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCT 794578
|| ||||| || | | |||| | || || |||||| || |||| ||| | ||
Sbjct 389930 GTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGGTAGGTTCG-CT 389988
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
| | || ||||||| ||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct 389989 GGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAATGTTCT 390048
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || |||||||||||| || || ||
Sbjct 390049 CCATCATGATCTGGAAGCCGTAGAAACA 390076
Score = 109 bits (120), Expect = 9e-18
Identities = 176/251 (70%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||| || ||| | || ||| |||||| |||||||||||||| | ||
Sbjct 389432 GACACCGGCCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAG 389491
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC--G 794009
||||| ||||| | ||| ||||||| | | |||| ||||||| || |
Sbjct 389492 GGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAG 389551
Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069
||||| |||| || || || |||||||| ||||||||||| ||||||| | | ||||
Sbjct 389552 AGCGA--CAAGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTC 389609
Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
||||||| || || ||| || | ||| ||| ||||| | || || ||||||
Sbjct 389610 ATGCCGAGAAGGGCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCA 389669
Query 794130 TCGATGATGAT 794140
|| |||||||
Sbjct 389670 TCAGTGATGAT 389680
>seq20
Length=2372104
Score = 118 bits (130), Expect = 2e-20
Identities = 181/258 (70%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||||||||| || || |||| ||| ||||| || ||||| || || | ||||| ||
Sbjct 1579818 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGA 1579877
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||| | ||| | || || | |||| | | ||
Sbjct 1579878 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 1579937
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || ||| ||||||||| | || || | || || || |||||||| |||||
Sbjct 1579938 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 1579997
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| |||| ||||||| || | || ||||| || || ||| || | | |||||
Sbjct 1579998 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 1580057
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||||||||||||
Sbjct 1580058 GGCATTGAAGAGCGTGGG 1580075
Score = 107 bits (118), Expect = 3e-17
Identities = 79/92 (86%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||||||||| |||||||||||| |||| ||||| ||| | |
Sbjct 2360114 GTACTTGGTGACAGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGTTCACCGGGGAG 2360173
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
|||||| || || | |||||||||||| ||||
Sbjct 2360174 GATCAGACGGACAGAGGTCTGGATCTCTCGGG 2360205
>seq26
Length=1520139
Score = 105 bits (116), Expect = 1e-16
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
|||||||||||||||||||||| || || || | || ||||| || || |||||| | |
Sbjct 1338448 CCAACTACCTCGACATCAAGCCTCTTCTTGACGTCGGTTGCAAAACTGTTGCCAACATGA 1338507
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
||||||||||||| ||||| || |||||||| || || ||||| | | |||
Sbjct 1338508 TCAAGGGCAAGTCTCCCGAAGAGATCCGCAAAACTTTCAACATTACGAACG 1338558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915132126473525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |