Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq129 127 3e-23 seq20 118 2e-20 seq26 105 1e-16 >seq129 Length=448370 Score = 127 bits (140), Expect = 3e-23 Identities = 228/328 (70%), Gaps = 5/328 (2%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | ||||| ||| || || |||||||| || ||||| Sbjct 389753 ACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGACCACGCTT 389812 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| || || | ||| || ||| ||||| ||||| || || || || Sbjct 389813 CTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCGAA 389872 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||| || | |||||| | || || | | | | |||||| || ||||| Sbjct 389873 AGCAACGAGACGTTGGGCAAAGGAAG--AGTCCTTATCT-TGGATCCATCGGATGGCCCA 389929 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCT 794578 || ||||| || | | |||| | || || |||||| || |||| ||| | || Sbjct 389930 GTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGGTAGGTTCG-CT 389988 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | | || ||||||| ||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct 389989 GGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAATGTTCT 390048 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || |||||||||||| || || || Sbjct 390049 CCATCATGATCTGGAAGCCGTAGAAACA 390076 Score = 109 bits (120), Expect = 9e-18 Identities = 176/251 (70%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||| || ||| | || ||| |||||| |||||||||||||| | || Sbjct 389432 GACACCGGCCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAG 389491 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC--G 794009 ||||| ||||| | ||| ||||||| | | |||| ||||||| || | Sbjct 389492 GGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAG 389551 Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||||| |||| || || || |||||||| ||||||||||| ||||||| | | |||| Sbjct 389552 AGCGA--CAAGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTC 389609 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 ||||||| || || ||| || | ||| ||| ||||| | || || |||||| Sbjct 389610 ATGCCGAGAAGGGCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCA 389669 Query 794130 TCGATGATGAT 794140 || ||||||| Sbjct 389670 TCAGTGATGAT 389680 >seq20 Length=2372104 Score = 118 bits (130), Expect = 2e-20 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||||||||| || || |||| ||| ||||| || ||||| || || | ||||| || Sbjct 1579818 CTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACGACACCGTTCGA 1579877 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||| | ||| | || || | |||| | | || Sbjct 1579878 TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGGATACGGTGCACATTCAGACC 1579937 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || ||| ||||||||| | || || | || || || |||||||| ||||| Sbjct 1579938 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 1579997 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || |||| ||||||| || | || ||||| || || ||| || | | ||||| Sbjct 1579998 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 1580057 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 |||||||||||||||||| Sbjct 1580058 GGCATTGAAGAGCGTGGG 1580075 Score = 107 bits (118), Expect = 3e-17 Identities = 79/92 (86%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||||||||| |||||||||||| |||| ||||| ||| | | Sbjct 2360114 GTACTTGGTGACAGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGTTCACCGGGGAG 2360173 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 |||||| || || | |||||||||||| |||| Sbjct 2360174 GATCAGACGGACAGAGGTCTGGATCTCTCGGG 2360205 >seq26 Length=1520139 Score = 105 bits (116), Expect = 1e-16 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 |||||||||||||||||||||| || || || | || ||||| || || |||||| | | Sbjct 1338448 CCAACTACCTCGACATCAAGCCTCTTCTTGACGTCGGTTGCAAAACTGTTGCCAACATGA 1338507 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 ||||||||||||| ||||| || |||||||| || || ||||| | | ||| Sbjct 1338508 TCAAGGGCAAGTCTCCCGAAGAGATCCGCAAAACTTTCAACATTACGAACG 1338558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915132126473525