Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq4 150 1e-30
>seq4
Length=1907009
Score = 150 bits (166), Expect = 1e-30
Identities = 701/1102 (64%), Gaps = 17/1102 (2%)
Strand=Plus/Minus
Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439
||| ||||| ||| || ||||| ||| || || || |||| | || || |
Sbjct 675680 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 675621
Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499
||||| |||||||| | ||| || ||||| |||||||| || || || | | |||||
Sbjct 675620 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACACCACGGGGGGCAGG 675561
Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559
||||| || | | || | |||| || || || || ||| || || ||
Sbjct 675560 AGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTGGTGCGTTGACGCTC 675501
Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619
||||||| | | |||||| ||| ||| || || || || | || | || ||
Sbjct 675500 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 675441
Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
||| || || ||| || || ||||| | |||| |||||||| |||||||||||
Sbjct 675440 GGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 675381
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737
|| || | ||| ||||| || || | |||||| | || | || | || | | ||
Sbjct 675380 GGTCTCGATACCGAGAGAGAGGGGGGCGACATCGAGAAGCAGGATCTCGTTGGTGGCCTT 675321
Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796
| | || | ||| ||||| || || || | || ||||| || |||||||| ||
Sbjct 675320 GCTGGAGGTGTCACCGGAGAGAATCGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 675261
Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856
||| || || | | | || | | || || ||||| | | | | || | |||
Sbjct 675260 ATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCGGTGATGAGCT-TCT 675202
Query 281857 -TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915
|| || ||||| | ||||| || || | ||||| || || || | || || |
Sbjct 675201 GGACACGGGGGATACGGGTAGATCCACCGACGAGAACAATCTCGTGGACGAGGGACTTGT 675142
Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975
| | || | || | || || ||||| | | | | || || | ||
Sbjct 675141 CGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGATAGTGGATCGGAAAAGATCCT 675082
Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033
|| || || ||||| ||| | || || || | || || ||||| || |||||
Sbjct 675081 GGCAGAGCTCCTCGAAACGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCCTCGAA 675024
Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093
| ||| |||| || |||| || |||| || ||||| |||| || || ||||| ||
Sbjct 675023 GAGAGAGTCAATCTCGATCGAGGTCTGAGCAGAGGAAGAAAGTGTTCGCTTGGCACGCTC 674964
Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA--TTGAT--TCAAATCTGTTTTAT 282149
|| || || | || | ||| | ||| || || ||| | |||| || | || |
Sbjct 674963 GCAAGCAGTTCGGAGACGTCGCAGGGC----GCGGACGTTGGTGCTCAAGTCCTTCTTGT 674908
Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 282209
||||||||||| || | || | | || ||||| || || || || ||||| |
Sbjct 674907 GCTTTCTCTTGAATTCATTTACGAAGTGGTTGACCAGACGGTTGTCGAAGTCCTCACCAC 674848
Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269
|||| | ||| | || | |||| | || | ||| | || || |||| | | |
Sbjct 674847 CCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTAAGGA 674788
Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT 282329
||| ||||| ||| |||||||| | ||| || || || || || || ||
Sbjct 674787 GAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACGTTGCGCTCGCCCTCAA 674728
Query 282330 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389
|| || |||||||| || |||| || |||||||| || || || ||||||| | ||
Sbjct 674727 CCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCGTTGATAATTCGGAGAA 674668
Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449
| || ||||| || || || ||||| || |||||||| | || |||||||| || |
Sbjct 674667 CGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGCTGAGAATCGTTGAAGT 674608
Query 282450 ATGCAGGAACAGTAATAACGGC 282471
| ||||| ||||||| ||||||
Sbjct 674607 AGGCAGGGACAGTAACAACGGC 674586
Score = 98.7 bits (108), Expect = 7e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| || |||||| || | || || |||||||| ||||||||||| | || ||||||
Sbjct 537083 GGTAAGGAGGGTCGTCTTCGTGGTAACTTGATGGGCAAGCGTGTCGACTTTTCGGCACGT 537142
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || |||||| |||| | ||| || |||| | || |||||||| |||| || ||||
Sbjct 537143 ACTGTCATTACTGGTGATGCCAATCTTTCTCTACACGAGGTTGGTGTCCCTCGCAGTATT 537202
Query 432408 GC 432409
||
Sbjct 537203 GC 537204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740116121767350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |