Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4 150 1e-30 >seq4 Length=1907009 Score = 150 bits (166), Expect = 1e-30 Identities = 701/1102 (64%), Gaps = 17/1102 (2%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||| || ||||| ||| || || || |||| | || || | Sbjct 675680 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 675621 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | ||| || ||||| |||||||| || || || | | ||||| Sbjct 675620 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGGGGAACACCACGGGGGGCAGG 675561 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| || || || || ||| || || || Sbjct 675560 AGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTGGTGCGTTGACGCTC 675501 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| | | |||||| ||| ||| || || || || | || | || || Sbjct 675500 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 675441 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || ||| || || ||||| | |||| |||||||| ||||||||||| Sbjct 675440 GGACTTCTTGGTAGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTCATCATACCACCAGC 675381 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| || || | |||||| | || | || | || | | || Sbjct 675380 GGTCTCGATACCGAGAGAGAGGGGGGCGACATCGAGAAGCAGGATCTCGTTGGTGGCCTT 675321 Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | | || | ||| ||||| || || || | || ||||| || |||||||| || Sbjct 675320 GCTGGAGGTGTCACCGGAGAGAATCGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 675261 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 ||| || || | | | || | | || || ||||| | | | | || | ||| Sbjct 675260 ATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAGTAGTCGGTGATGAGCT-TCT 675202 Query 281857 -TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 || || ||||| | ||||| || || | ||||| || || || | || || | Sbjct 675201 GGACACGGGGGATACGGGTAGATCCACCGACGAGAACAATCTCGTGGACGAGGGACTTGT 675142 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975 | | || | || | || || ||||| | | | | || || | || Sbjct 675141 CGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGATAGTGGATCGGAAAAGATCCT 675082 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033 || || || ||||| ||| | || || || | || || ||||| || ||||| Sbjct 675081 GGCAGAGCTCCTCGAAACGAGCACGGGT--GATGGAGGTGTAGAAGTCAATACCCTCGAA 675024 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | ||| |||| || |||| || |||| || ||||| |||| || || ||||| || Sbjct 675023 GAGAGAGTCAATCTCGATCGAGGTCTGAGCAGAGGAAGAAAGTGTTCGCTTGGCACGCTC 674964 Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA--TTGAT--TCAAATCTGTTTTAT 282149 || || || | || | ||| | ||| || || ||| | |||| || | || | Sbjct 674963 GCAAGCAGTTCGGAGACGTCGCAGGGC----GCGGACGTTGGTGCTCAAGTCCTTCTTGT 674908 Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 282209 ||||||||||| || | || | | || ||||| || || || || ||||| | Sbjct 674907 GCTTTCTCTTGAATTCATTTACGAAGTGGTTGACCAGACGGTTGTCGAAGTCCTCACCAC 674848 Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269 |||| | ||| | || | |||| | || | ||| | || || |||| | | | Sbjct 674847 CCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTAAGGA 674788 Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT 282329 ||| ||||| ||| |||||||| | ||| || || || || || || || Sbjct 674787 GAGACACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACGTTGCGCTCGCCCTCAA 674728 Query 282330 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389 || || |||||||| || |||| || |||||||| || || || ||||||| | || Sbjct 674727 CCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCGTTGATAATTCGGAGAA 674668 Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449 | || ||||| || || || ||||| || |||||||| | || |||||||| || | Sbjct 674667 CGTTGAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGCTGAGAATCGTTGAAGT 674608 Query 282450 ATGCAGGAACAGTAATAACGGC 282471 | ||||| ||||||| |||||| Sbjct 674607 AGGCAGGGACAGTAACAACGGC 674586 Score = 98.7 bits (108), Expect = 7e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || | || || |||||||| ||||||||||| | || |||||| Sbjct 537083 GGTAAGGAGGGTCGTCTTCGTGGTAACTTGATGGGCAAGCGTGTCGACTTTTCGGCACGT 537142 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | ||| || |||| | || |||||||| |||| || |||| Sbjct 537143 ACTGTCATTACTGGTGATGCCAATCTTTCTCTACACGAGGTTGGTGTCCCTCGCAGTATT 537202 Query 432408 GC 432409 || Sbjct 537203 GC 537204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740116121767350