Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq17 95.1 8e-15
>seq17
Length=1920523
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/228 (70%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605
||| |||||| ||| || || ||||||||||| ||||| ||||| |||| || | ||
Sbjct 1066937 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 1066996
Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665
|| ||||| |||||||| || ||||| || | || | || || ||||| ||| ||
Sbjct 1066997 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 1067056
Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
| | |||| ||| | |||||| || || || || | ||||| || || || |
Sbjct 1067057 -GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 1067115
Query 33725 TTAACGTTTTTACAAAGATCTGCATAGTTGGTGTG-TTTATCGCGCAA 33771
||| || || || ||||||||||| || | ||| | | ||||| ||
Sbjct 1067116 TTAGGGTCTTGACGAAGATCTGCATGGTGGCGGTGATCTGTCGCGAAA 1067163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328662036312000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |