Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 8e-15 >seq17 Length=1920523 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| |||||| ||| || || ||||||||||| ||||| ||||| |||| || | || Sbjct 1066937 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 1066996 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| |||||||| || ||||| || | || | || || ||||| ||| || Sbjct 1066997 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 1067056 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | | |||| ||| | |||||| || || || || | ||||| || || || | Sbjct 1067057 -GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 1067115 Query 33725 TTAACGTTTTTACAAAGATCTGCATAGTTGGTGTG-TTTATCGCGCAA 33771 ||| || || || ||||||||||| || | ||| | | ||||| || Sbjct 1067116 TTAGGGTCTTGACGAAGATCTGCATGGTGGCGGTGATCTGTCGCGAAA 1067163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328662036312000