Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq17 102 2e-16 >seq17 Length=1920523 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| ||||| || ||||| | || || || | |||||| |||| Sbjct 1066387 AAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGTGACACTATCGACAAC 1066328 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || ||| || || || | ||||||||| Sbjct 1066327 GTGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAGCAGCGTCTTATCTTC 1066268 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||||||||| | || || ||| || ||| ||||||| ||||| Sbjct 1066267 GCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAACATCCAGAAGGAGTCA 1066208 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| ||| | ||||||| Sbjct 1066207 ACTCTCCACCTCGTTCTCCGACTTCG 1066182 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| | ||| ||||| ||||| ||||| ||||||| |||||||| || || Sbjct 1066182 CGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTG 1066241 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||||| |||||| || ||||||||||| || || ||| Sbjct 1066242 CGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGA 1066286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181662186722475