Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq17 102 2e-16
>seq17
Length=1920523
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| ||||| || ||||| | || || || | |||||| ||||
Sbjct 1066387 AAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGTGACACTATCGACAAC 1066328
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || || || ||| || || || | |||||||||
Sbjct 1066327 GTGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAGCAGCGTCTTATCTTC 1066268
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||||||||| | || || ||| || ||| ||||||| |||||
Sbjct 1066267 GCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAACATCCAGAAGGAGTCA 1066208
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||| ||| | |||||||
Sbjct 1066207 ACTCTCCACCTCGTTCTCCGACTTCG 1066182
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||| | ||| ||||| ||||| ||||| ||||||| |||||||| || ||
Sbjct 1066182 CGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTG 1066241
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| |||||||||| |||||| || ||||||||||| || || |||
Sbjct 1066242 CGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGA 1066286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181662186722475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |