Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq21 102 7e-17 seq17 100 3e-16 >seq21 Length=1112876 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || || |||||||| || ||||| Sbjct 502487 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 502428 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || |||||||||| |||||| ||| | || Sbjct 502427 GATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 502369 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | |||||||| || || || | || || | Sbjct 502368 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGA 502309 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 502308 CGAAAATCTGCAT 502296 >seq17 Length=1920523 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||||| | |||||| |||| ||||| ||||| || ||||| Sbjct 1066668 TCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAA 1066727 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | ||| | | |||||||||| |||||| ||| | | | Sbjct 1066728 ATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACATTG 1066787 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || ||| ||| || ||||| | ||||| || || || || | || || || Sbjct 1066788 TCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACG 1066847 Query 35726 AATAT 35730 | ||| Sbjct 1066848 ACTAT 1066852 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | || || |||| || |||||||| || || || Sbjct 1066949 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 1067008 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || |||||||| | || | || |||||||||| ||||| ||| | | | Sbjct 1067009 AATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATT 1067068 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || || || | || || || Sbjct 1067069 GTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGAC 1067128 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 1067129 GAAGATCTGCAT 1067140 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| ||||| ||||||||||| |||| Sbjct 1066404 CCACCACGAAGACGGAGCACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 1066463 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || || ||||| || ||||| || | ||||| || |||| ||| Sbjct 1066464 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGA 1066523 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||||| | | | | || ||| || || || Sbjct 1066524 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACT 1066583 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || || || || || | || || || || || ||||| Sbjct 1066584 TCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 1066630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450734574213000