Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq129 91.5 2e-13 >seq129 Length=448370 Score = 91.5 bits (100), Expect = 2e-13 Identities = 358/559 (64%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| |||||| || || ||||| || | | || | |||||||| || || || Sbjct 389732 GCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAG 389791 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| ||||||||||| |||||||| || || | || || | ||| ||||| Sbjct 389792 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAA 389851 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TG 39792 ||| || || || || || || ||||| || | | | | | || ||| || Sbjct 389852 GATACCCTCAACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTG 389911 Query 39793 TATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | || ||||| ||||| ||||| | || || || || || || || | Sbjct 389912 GATCCATCGGATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGT 389970 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 | || || || | | | || || | ||| || || || | || || Sbjct 389971 TGAAAAGGTAGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGG 390030 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || || || ||||| || ||| ||||| || ||||| ||||| | || || | | Sbjct 390031 TCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGA 390090 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 | || ||||| || |||| || | | || || || || || |||||| || | Sbjct 390091 TCTGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAG 390150 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCC 40088 | || || || | | || | || | | ||||||| |||| || |||| Sbjct 390151 CGAAGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCC 390210 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| | || ||| || || | || | || ||||| ||||| || || ||||| |||| Sbjct 390211 AGTCGTGGAGATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCT 390270 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | ||| || Sbjct 390271 TCTTGTACATTTGCCAAAT 390289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686818857879000