Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq20 217 2e-51 seq129 170 2e-37 >seq20 Length=2372104 Score = 217 bits (240), Expect = 2e-51 Identities = 1097/1720 (64%), Gaps = 45/1720 (3%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 1578428 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGC 1578487 Query 117865 CCTGCTTCCAGGCATACATA-TGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATG 117923 | |||||||| | | || | ||||| || | |||| | || || | |||| Sbjct 1578488 CAAGCTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 1578546 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||||| ||||| ||||| |||||| || ||||| || ||||| | | Sbjct 1578547 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGGACG 1578606 Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043 || | | ||| ||||| |||||| | || || ||| | ||| | ||||| Sbjct 1578607 ACCTGGCGCTGAGAGATCTCCCAAACAGTCTTATACAGAGCCTTGACATCGGCAGGGATG 1578666 Query 118044 TCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 118103 | || || || ||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 1578667 TTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 1578726 Query 118104 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 118163 || ||||| || | || |||| | || |||||||| |||||||| Sbjct 1578727 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 1578786 Query 118164 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 118223 ||||| || | | |||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 1578787 GCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 1578846 Query 118224 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 118283 | || |||| || ||| || ||||| || || | ||| || |||||||||| || Sbjct 1578847 AGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGTAGACTGTTACGGATGCCG 1578906 Query 118284 TTTTCCCTAATGCGTTC-CTTGA-GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 118341 | | | | | | | | || || |||| |||||||| || | | || | | Sbjct 1578907 TGTGTCTTGA--CTTCCTCTCGAAGAGCCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGT 1578964 Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401 |||||| || |||||||| ||||| | || || || || |||| || || || | Sbjct 1578965 TCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGG 1579024 Query 118402 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTT 118458 | ||||| ||| |||| | ||||| || ||| || |||||||| || || | Sbjct 1579025 GACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGCGCAGCGTGATAAATGGTCT 1579081 Query 118459 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 118517 |||| || | ||| | | |||||| ||| || || | | || || | | Sbjct 1579082 CAAAGATCTGCTTATTGAGCTCACGAGCCTCGGGGGACTCGAAGGGCATGCG-CAGAGCA 1579140 Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577 | || |||| || ||||| || ||||| || ||||| || || || | ||| ||| Sbjct 1579141 AGGAAAGCATCGGCAAGACCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 1579200 Query 118578 TTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 118637 || ||||| || || || || ||| |||||| | | | || || || | Sbjct 1579201 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATA 1579260 Query 118638 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACA 118697 ||||||| ||| | || ||||| | | | || | || || ||| || | | Sbjct 1579261 ACAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGT-- 1579315 Query 118698 TACTTAGGAAGGGC---GATTGAC--GCCAGATTACACACAGAGGTCTCATCCTTATCAG 118752 | | | | ||||| ||| || || || || || || | | ||| || || Sbjct 1579316 TGATGAAGGAGGGCAGAGATAGAGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGGGCAC 1579375 Query 118753 TGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 118812 |||||| |||||||| ||||| | || || || ||||| || | ||||||||| | Sbjct 1579376 AGTACTCGATAATTTCAGTGCAAAGATTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGT 1579435 Query 118813 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872 | ||| ||| || ||||||||||| |||||| |||| | || ||||| || |||| Sbjct 1579436 TACTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGG 1579495 Query 118873 ACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCAC-AGTGGCGTTGGCTCGCCCCTC 118930 || ||||| || | ||| | | || | || | | | ||| || |||| | Sbjct 1579496 CCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTGCG-ACCCTTGCCCGCC 1579554 Query 118931 TTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 118990 || |||||||||| ||| || || || ||||| || || | || | ||| || || Sbjct 1579555 TT-CTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGG 1579613 Query 118991 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 119050 || || ||||| | || | ||| | ||| || |||||| ||||||||||| || Sbjct 1579614 GCACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAAAG 1579673 Query 119051 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 119110 || |||||||| || || ||| || || || || | || || | || || || Sbjct 1579674 ATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCGTGGTT 1579733 Query 119111 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 119170 ||| | || | || || | || ||| | |||||| || || ||||| | || | Sbjct 1579734 CTTACGGAGATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATGGCAAA 1579793 Query 119171 TG-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | || | ||| | | ||| |||||| ||||||| |||||| ||| || || Sbjct 1579794 AGCACCGGGTCGCTT--GTTG-CCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGAC 1579850 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTA 119282 ||||||||| |||| || ||| | ||| || || || || ||| || ||| | | Sbjct 1579851 ACGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCC--A 1579908 Query 119283 TTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 119342 | || | || | ||| | | || ||||||||| || ||| ||| ||||| || Sbjct 1579909 GTAGCACGGATACGGTGCACATTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCA 1579968 Query 119343 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402 || | ||||| | ||||||| || || || ||| |||| | | | | |||| Sbjct 1579969 CAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 1580028 Query 119403 CAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462 || |||| ||| ||| || || || || |||||||| || || | || || || Sbjct 1580029 CAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTG 1580088 Query 119463 AACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC 119500 | | | |||| |||||| || ||| ||||||||||| Sbjct 1580089 A--AGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGAC 1580126 >seq129 Length=448370 Score = 170 bits (188), Expect = 2e-37 Identities = 534/813 (66%), Gaps = 17/813 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||| ||||||||||||||||| ||||| ||| | | | ||| || ||||| Sbjct 389448 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATG 389507 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | |||| |||||||| Sbjct 389508 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-CCAAGAGCGACAAGGAGACG 389566 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||||| ||| || |||||||| |||| ||| ||| Sbjct 389567 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGGGCACA 389626 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || || |||| ||| |||||| || || || | ||| | || Sbjct 389627 GGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGATATCTTG 389686 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| ||| | ||| || | | || | || | || ||| || |||||| || Sbjct 389687 AATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 389743 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || |||||| |||||| |||||||| Sbjct 389744 AGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAG 389803 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | ||||||||| | || | ||| ||||||||| ||||| || Sbjct 389804 ACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAAC 389863 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203 | ||||| |||| |||||| | |||||||| | ||| | | ||| || Sbjct 389864 AGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTGGATCCATCGGAT 389923 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGAGTTCCT 130262 ||||| | ||||| || ||| || || | ||||| || || || ||| || | Sbjct 389924 GGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGGTAGGT 389983 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 || | | || || ||||| || | || ||||| || || || ||| || | Sbjct 389984 TC-GCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAA 390042 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | |||||||| | || || ||| ||||| ||||| Sbjct 390043 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGACCTC- 390100 Query 130382 TCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 130440 | | ||| | | || ||||| ||||| ||||| || |||| || || || Sbjct 390101 GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGAAAGC 390160 Query 130441 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 130497 ||||| | | ||| ||| |||| | ||| || | |||||||||| || Sbjct 390161 AAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCGTGGAG 390220 Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| ||||| || | |||||| |||||||| Sbjct 390221 ATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCA 390253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618354223641000