Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq4 178 4e-39
seq17 159 1e-33
seq21 105 2e-17
>seq4
Length=1907009
Score = 178 bits (196), Expect = 4e-39
Identities = 559/858 (65%), Gaps = 11/858 (1%)
Strand=Plus/Plus
Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321
|| || || || || || || |||||| |||| || || |||| ||| | || |||||
Sbjct 674241 GATATCATCGCCAACGACCAGGGTAACCGAACTACCCCCTCATTCGTCGGTTTCACCGAC 674300
Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381
|| |||||| ||||||||||| | || || || |||| ||| || || | || ||
Sbjct 674301 ACCGAGCGTCTGATTGGTGATGCCGCCAAGAACCAAGTCGCTATGAACCCCCAGAACACT 674360
Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441
|| || || || |||||| | || ||| | | || | ||| || | |||
Sbjct 674361 GTCTTCGACGCCAAGCGATTGATCGGTCGCAAGTTCGCCGACGCTGAGGTTCAGGCCGAT 674420
Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501
| || || || || || | | || | | ||| |||| ||| || | || |||||
Sbjct 674421 ATGAAGCACTTCCCCTTCAAGATCGT-CGACAAG--GGTGGTAAGCCCAACATCGAGGTC 674477
Query 349502 GAATATAAAGGTGA-ACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGGTTTTA 349558
|| | || || || || || || ||| |||| || || || || | ||| | |
Sbjct 674478 GAGTTCAAGGGCGAGACCAAGAC---TTTCACCCCCGAGGAGATCTCTGCTATGATCCTC 674534
Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618
|| ||| || | ||||| | || | || || || || | | || ||| ||
Sbjct 674535 ACCAAGATGCGTGAGACCGCTGAGTCTTACCTCGGCGAGACTGTCAACAACGCCGTTGTT 674594
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
||||| || ||||| || || ||| | |||||| || || || |||||||| |||
Sbjct 674595 ACTGTCCCTGCCTACTTCAACGATTCTCAGCGTCAAGCCACCAAGGATGCTGGTCTCATC 674654
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
|| || | || ||||| |||| || || || || |||||||| || ||||| || ||
Sbjct 674655 GCCGGTCTCAACGTTCTCCGAATTATCAACGAGCCTACTGCTGCCGCCATTGCCTACGGT 674714
Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798
||||| || | | ||| || || | || || || ||| | |||||||||||
Sbjct 674715 CTTGACAAGAAGGTTGAGGGCGAGCGCAACGTCCTGATCTTCGATCTTGGTGGTGGTACC 674774
Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858
|| ||||| || || || || |||| ||||| || || || || || | ||||| |||
Sbjct 674775 TTCGATGTGTCTCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCTACTGCCGGT 674834
Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918
|| || || | ||||| || || || || || ||||| || || || || || |||
Sbjct 674835 GACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTAAATGAA 674894
Query 349919 TTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCT-AGAGCAATGCGTCGCCTAAG 349977
|| ||| | |||| || | ||| | | | | | || |||| || || |
Sbjct 674895 TTCAAGAG-AAAGCACAAGAAGGACTTGAGCACCAACGTCCGCGCCCTGCGACGTCTCCG 674953
Query 349978 AACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAAT 350037
|||||| || || ||||| ||||| | | || || || | || ||||| || || ||
Sbjct 674954 AACTGCTTGCGAGCGTGCCAAGCGAACACTTTCTTCCTCTGCTCAGACCTCGATCGAGAT 675013
Query 350038 TGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGA 350097
||| ||||| || || | || |||| | || || || |||||||| || || ||
Sbjct 675014 TGACTCTCTCTTCGAGGGTATTGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGA 675073
Query 350098 ATTATGTATGGATCTTTT 350115
| || |||||||||
Sbjct 675074 GCTCTGCCAGGATCTTTT 675091
Score = 116 bits (128), Expect = 1e-20
Identities = 192/276 (70%), Gaps = 6/276 (2%)
Strand=Plus/Minus
Query 378201 ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGC 378260
|||||| | || |||| | |||||| ||||||||| |||| ||| || || ||
Sbjct 538633 ATCTTCCAGAGCCTTAACCAATCGTCGCTGAATATAACCTGTTTCGGCAGTCTTGACCGC 538574
Query 378261 AGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAG 378320
||||||||| | ||| | |||||| |||| || |||||||| || || | ||||| ||
Sbjct 538573 AGTATCAATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGCTGGGAGTGAG 538514
Query 378321 TCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGT 378380
|||| | | || |||| | ||| || | || | || || | ||| | || ||
Sbjct 538513 ACCACGGAGGTAAGAGTTCTCGACAAAGCCACGGGCCTCAGGTGAGTAATCGTCCTTGGT 538454
Query 378381 ATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTG 378440
| ||||||||||| |||| || || || | ||||| || || || |||||| | ||
Sbjct 538453 GAAGTGAGGTAATGTGCGATACTTGAAACCGAAAGGAATACGCTTGCCTTCAACAATTTG 538394
Query 378441 TTGAC---CAAGTGCAGAAACCATTTGAGCAATATT 378473
|||| |||| |||| |||||||| ||||||
Sbjct 538393 CTGACCGACAAGCGCAG---TCATTTGAGAAATATT 538361
Score = 107 bits (118), Expect = 6e-18
Identities = 104/133 (78%), Gaps = 3/133 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|||||||||||| | ||||| ||| || || | |||||||| || ||||| || ||
Sbjct 539394 CGTGGCACACCAAGAGTAACGTTC---TTGGACGACACACCAGCGAAATGGAAGGTGTTC 539338
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||||||| ||||||||||| |||||||| || | ||| || ||||||||
Sbjct 539337 AGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGAACACCGACCATTTCA 539278
Query 377578 CCAGGATTGACAA 377590
||||| |||||||
Sbjct 539277 CCAGGGTTGACAA 539265
>seq17
Length=1920523
Score = 159 bits (176), Expect = 1e-33
Identities = 176/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || |||||||| || || ||||| || || ||
Sbjct 1066400 CATACCACCACGAAGACGGAGCACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTC 1066459
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||||| ||||| |||||||| || ||||||||||| || || || ||||| ||
Sbjct 1066460 GGAAAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGG 1066519
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
||||| || || || ||||| || || ||| || ||||||||||| | ||| |||| |
Sbjct 1066520 GGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTATCAATGGTATCGGATGACT 1066578
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| ||||| || |||| |||||||| || || || || || || || |||||
Sbjct 1066579 CGACTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 1066630
Score = 149 bits (164), Expect = 2e-30
Identities = 174/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||||||||||||||| ||||| || ||||| || |
Sbjct 1066906 TTTGCATACCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGT 1066965
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | || || || || ||||| || || || || || || | |||||||| |
Sbjct 1066966 AATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGT 1067025
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || || || || || || |||||||| || | || ||||| || || | || || |
Sbjct 1067026 CGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAG 1067085
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || || || | ||||| |||||||| || || || || ||||||||
Sbjct 1067086 ACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1067140
Score = 131 bits (144), Expect = 5e-25
Identities = 175/241 (73%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 140498 AATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAAT 140557
|||| |||| ||||| || | || ||||| || || ||||| ||||| || || ||
Sbjct 1066163 AATAGCTTACTGGCCACCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGAT 1066222
Query 140558 ATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTG 140617
||||| || | || || |||||||| | || || ||||| ||||| ||||| ||
Sbjct 1066223 GTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTG 1066282
Query 140618 CTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAAT 140676
|||||| || ||||| || || ||||||||||| || ||| || || || || || | |
Sbjct 1066283 CTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTT-GCTCTTCACGTTGTCGATAGTGT 1066341
Query 140677 CAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736
|| | ||||| ||||| || | |||||||| || || || || || ||||||||||
Sbjct 1066342 CACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCA 1066401
Query 140737 T 140737
|
Sbjct 1066402 T 1066402
Score = 127 bits (140), Expect = 6e-24
Identities = 162/223 (73%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || |||||||| ||||| || || || || || |
Sbjct 1066624 TTTGCATACCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGT 1066683
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | | ||||| || ||||| ||||| ||||||||||| || || || ||||| |
Sbjct 1066684 AGTCGGCAAGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAGGCGCTGCTGGT 1066743
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || || || || ||||| || || | || ||||| || || | ||| || |
Sbjct 1066744 CAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCGGACG 1066803
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || ||||| || | ||||| || || || || || ||
Sbjct 1066804 ACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 1066846
>seq21
Length=1112876
Score = 105 bits (116), Expect = 2e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || || || ||||| || || || || || ||
Sbjct 502526 CATACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 502467
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| || || ||||| || || || || ||||||||||| || || ||||| |||||
Sbjct 502466 GCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGG 502407
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || ||||| || || | || || || || || | || || | ||
Sbjct 502406 GGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTC 502347
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | ||||| || || || || || || |||||||||||
Sbjct 502346 CACCTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCAT 502296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515051036286425
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