Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq20 242 4e-59
seq18 136 4e-27
>seq20
Length=2372104
Score = 242 bits (268), Expect = 4e-59
Identities = 518/764 (68%), Gaps = 26/764 (3%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || | | |||||| ||||| || | ||| ||| ||||| |||
Sbjct 1580170 TCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGTCTTGGAGACATACA 1580111
Query 53253 ACTTAATGAGCCAA--AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310
|| | ||| ||| |||| ||| ||||| || | || || || ||||| || || ||
Sbjct 1580110 ACCTGATGT--CAAGCAAGTTCTTCACGCATGCTTCCCCCACGCTCTTCAATGCCGGCAC 1580053
Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370
||| || || |||| |||||| |||| | |||||||| ||| || || ||
Sbjct 1580052 CCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGACAGTATTGAGGG 1579993
Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430
|||||||| || |||||| |||||| ||||||||| | | |||||||| ||| |
Sbjct 1579992 AATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCT 1579933
Query 53431 CCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCG 53486
| ||| | | | ||||||| | ||| || ||| || || ||||| | |||
Sbjct 1579932 GAATGTGCACCGTA--TCCGTGCTACTGGCTCATACATCGCCGGTACCAACGGTACATCG 1579875
Query 53487 CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGG 53546
| || |||| |||||||| || |||||||||||||| || ||||| ||| ||||||
Sbjct 1579874 A--ACGGTGTCGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGTATGTCGACCAGG 1579817
Query 53547 GTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTA 53606
|||| ||||| || | || ||||||||||||||||| |||||| |||| |
Sbjct 1579816 GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCCGATGTCT 1579757
Query 53607 TGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGT 53666
| ||||| || || || ||| ||| || ||| | || ||| | || ||||||||| |
Sbjct 1579756 TCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGACCTTT 1579697
Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726
| || || ||||| || || || |||||| | || |||||| ||| || |||
Sbjct 1579696 TCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACGGTGACTGGA 1579637
Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAAC 53785
|| |||||||| || |||||||| |||||| | | || |||||| |||||||| |
Sbjct 1579636 CACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTG-CTACGGAGAGGAGTTCGAG 1579578
Query 53786 GAGATGTATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839
| |||| | |||| || | |||| ||| |||| | |||||||
Sbjct 1579577 GCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGC------AAGACGATCAAGGCT 1579524
Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899
| || | ||| | || || || || |||| ||||| |||| || | |||| |
Sbjct 1579523 CAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCATTCATGCTC 1579464
Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
||||||||| | |||| ||||| ||||| |||||| ||||
Sbjct 1579463 TACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGG 1579420
Score = 91.5 bits (100), Expect = 2e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
||||||||| ||||| | ||| || ||||||||||| ||||||||| |||| || | ||
Sbjct 1578594 TGCTGATCGAGGTGCCTTCATTGATCAGTCCCAGTCACTGAACATCCACATGAAGGACCC 1578535
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| ||| |||| | | | ||||||||| || |||||| || |||||||| ||
Sbjct 1578534 CACGATGGGCAAGATCACCAGTATGCACTTTGCAGGCTGGAAGCTTGGCCTCAAGACTGG 1578475
Query 55906 TATGTACTATCTGCGGAC 55923
|||||||| || || ||
Sbjct 1578474 CATGTACTACCTTCGTAC 1578457
>seq18
Length=856328
Score = 136 bits (150), Expect = 4e-27
Identities = 209/296 (71%), Gaps = 4/296 (1%)
Strand=Plus/Plus
Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358
|| |||||||| ||||||||| || |||||||| ||||||||||| || | ||||
Sbjct 629447 AGCCGAGTGAAGGTGTAACGAGGACTGGCAGCATCAGATCCACCAGCAAGTCGAGAACCG 629506
Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418
|| | |||||| || |||| || | |||||| | || |||||||| || |||| |
Sbjct 629507 AAGTTTCCACTGGGTTCCAGACAATTGATGTTGTTTGAACCAACAAAGTTCTGGGCCAGG 629566
Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478
| || || |||||| | ||||| ||||| || || |||||||| | ||
Sbjct 629567 CCAATGATAGTCTGTTGGAGAGACTGTTCACCGTGGTGGTAGGCAGTCTGCTCAGAGACA 629626
Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536
|| || |||| | | | |||||| |||| ||||| | ||| |||||| ||||||||
Sbjct 629627 TAACCAGCCAATTCAACGACCTTCTTGTCTTTGACG--ATGTTTCTCTTGAAGCAGGCAT 629684
Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGC 117592
| || ||||| ||||||| ||||| | || ||| ||| ||||| || |||
Sbjct 629685 ATATGACCTTACGCTGACCGGGCTTGAAGCCGTCCAGCACCGAGGGGATGGATCGC 629740
Score = 86.0 bits (94), Expect = 7e-12
Identities = 184/275 (67%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085
|| |||||| |||| || | ||||| ||||| ||||| || || || | || ||
Sbjct 629450 CGAGTGAAGGTGTAACGAGGACTGGCAGCATCAGATCCACCAGCAAGTCGAGAACCGAAG 629509
Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145
| |||| ||| || || |||| |||||| | || || || ||||| ||||
Sbjct 629510 TTTCCACTGGGTTCCAGACAATTGATGTTGTTTGAACCAACAAAGTTCTGGGCCAGGCCA 629569
Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205
| || || || ||| | |||||||||||| || || |||||||| | || ||
Sbjct 629570 ATGATAGTCTGTTGGAGAGACTGTTCACCGTGGTGGTAGGCAGTCTGCTCAGAGACATAA 629629
Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265
|| ||||| | | |||||| |||| | | ||| |||||| ||||| || ||
Sbjct 629630 CCAGCCAATTCAACGACCTTCTTGTCTTTGACGATGTTTCTCTTGAAGCAGGCATATATG 629689
Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300
||||| ||||| || || || ||||||| |||
Sbjct 629690 ACCTTACGCTGACCGGGCTTGAAGCCGTCCAGCAC 629724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547144348905000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |