Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq17 100 2e-16
>seq17
Length=1920523
Score = 100 bits (110), Expect = 2e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| |||||||| ||||| |||||||| || || |||
Sbjct 1066404 CCACCACGAAGACGGAGCACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 1066463
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | || |||||||| || || ||||| || | |||||||| ||||| ||
Sbjct 1066464 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGA 1066523
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 1066524 ATGCCCTCCTTGTCCTGGATCTT 1066546
Score = 87.8 bits (96), Expect = 1e-12
Identities = 148/213 (69%), Gaps = 10/213 (5%)
Strand=Plus/Plus
Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562
||| |||||| |||||| |||||||| ||||| || || || || |||| ||||| ||
Sbjct 1066937 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 1066996
Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
|| ||||| || || || || || ||||| || || | ||||||||||| |||||
Sbjct 1066997 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 1067056
Query 34623 ----TTG-TTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677
||| || ||||| ||||| ||| || || | ||| || || ||
Sbjct 1067057 GGACTTGACATTGTCGATA-----GTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 1067111
Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||||| || || || || ||||||||| ||
Sbjct 1067112 CCGGTTAGGGTCTTGACGAAGATCTGCATGGTG 1067144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314689420340675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |