Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq17 100 2e-16 >seq17 Length=1920523 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| |||||||| ||||| |||||||| || || ||| Sbjct 1066404 CCACCACGAAGACGGAGCACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 1066463 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || |||||||| || || ||||| || | |||||||| ||||| || Sbjct 1066464 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGA 1066523 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 1066524 ATGCCCTCCTTGTCCTGGATCTT 1066546 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/213 (69%), Gaps = 10/213 (5%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| |||||| |||||| |||||||| ||||| || || || || |||| ||||| || Sbjct 1066937 ATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTG 1066996 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || || || || ||||| || || | ||||||||||| ||||| Sbjct 1066997 CTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 1067056 Query 34623 ----TTG-TTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 ||| || ||||| ||||| ||| || || | ||| || || || Sbjct 1067057 GGACTTGACATTGTCGATA-----GTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 1067111 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||||||| || || || || ||||||||| || Sbjct 1067112 CCGGTTAGGGTCTTGACGAAGATCTGCATGGTG 1067144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314689420340675