Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq17 104 2e-17
seq21 91.5 1e-13
>seq17
Length=1920523
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| ||||| ||||| || |
Sbjct 1067140 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 1067081
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | || | || | || ||||| || || | || || || ||
Sbjct 1067080 GACACTATCGACAATGTCAAGTCCAAGA-TTCAGGACAAGGAGGGCATCCCCCCCGACCA 1067022
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| || || || || |||||||| || || || |||| |||||| | ||||||||
Sbjct 1067021 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 1066962
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| || || |||||||| | ||| | |||
Sbjct 1066961 CATTCAGAAGGAGTCCACTCTTCATCTTGTT 1066931
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| ||||| || ||||| || || ||||| || |
Sbjct 1066402 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 1066343
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | || | | || || ||| || || || || | || ||||||||
Sbjct 1066342 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAG 1066283
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || || || || ||||||| | ||||| | |||| || |||
Sbjct 1066282 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAAC 1066223
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 1066222 ATCCAGAAGGAGTCAAC 1066206
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || ||||| || ||||| || || ||||| ||||| || || |
Sbjct 1066630 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 1066571
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | || | | ||||| || || | || || |||||
Sbjct 1066570 GATACCATTGATAATGTGAAGAGCAAGA-TCCAGGACAAGGAGGGCATTCCCCCGGATCA 1066512
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| ||||| ||||| || || | || ||| | ||| |||||
Sbjct 1066511 ACAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAA 1066452
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || || || ||
Sbjct 1066451 CATTCAGAAGGAATCTAC 1066434
>seq21
Length=1112876
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || |||||||| || || |||||||| || || || || ||
Sbjct 502293 AAGATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 502352
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | || | | || || || ||||| || || | || || ||
Sbjct 502353 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 502412
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| | || ||||| ||||| || || || || | ||||| | |||| |||
Sbjct 502413 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 502472
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || || ||||||||
Sbjct 502473 AACATCCAGAAGGAGTCCAC 502492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337966448321300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |