Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27]
10,475 sequences; 64,162,265 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq20 165 1e-35
>seq20
Length=2372104
Score = 165 bits (182), Expect = 1e-35
Identities = 432/652 (66%), Gaps = 8/652 (1%)
Strand=Plus/Plus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|||||||| ||||| |||||||| | || ||||||||| | | || ||| || |||||
Sbjct 1579609 CCAGGGCACTCATTGGGGCACATAAGTGTCCAGTCACCGTTCTTCTCAACACGCTTCATG 1579668
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
|| |||||||| ||||| || |||| || || || |||| | || || || ||
Sbjct 1579669 AAAAGATCAGGGATCCAAAGGGCAAGGAAAAGGTCACGGGCACGGACCTCCTCCTTACCG 1579728
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| ||||| || ||||| | | ||| || ||||| || || || || ||
Sbjct 1579729 TGGTTCTTACGGAGATCAAGGAACTCGAAGACATCGGAGTGCCAAGGCTCGAGGTAGATG 1579788
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | | || ||||| || || || ||||| || | ||| | || ||||| || |
Sbjct 1579789 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 1579848
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| |||| | |||||| ||||| || || || || | || || |||
Sbjct 1579849 ACACGAAGCATAGGAACGACACCGTTCGATGTACCGTTGGTACCGGCGATGTATGAGCCA 1579908
Query 78255 CTTGCGCGAATAT--TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312
| || || ||| | | || | | || || || || |||||||| || || | |
Sbjct 1579909 GTAGCACGGATACGGTGCACATTCAGA--CCAATACCACCAGCCATCTTGGAGATCATGG 1579966
Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAA-GAAGA 78371
| || || | ||||||||||| ||||| |||||||| ||| |||| | || ||||
Sbjct 1579967 CACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA 1580026
Query 78372 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431
| || | |||| ||| | ||| || || ||||| || | || || || ||||||
Sbjct 1580027 AGCAAGAT-GACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGC 1580085
Query 78432 GTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTG 78490
|| || | || || | || |||||||| || | || || || || ||
Sbjct 1580086 GTGAAGAACTTGCTTGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCC 1580145
Query 78491 ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATT 78550
| || || || | |||||||| | ||| ||||| || | || || ||||| |
Sbjct 1580146 CAG-ATACCAACAGACACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTACCGTC 1580204
Query 78551 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 78602
|| || | | ||||||| |||||||| || || ||||| || | ||||
Sbjct 1580205 AATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 1580256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694577841804000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |