Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F002234285.1_202017-07-27] 10,475 sequences; 64,162,265 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq21 168 1e-36 seq17 163 6e-35 seq39 152 1e-31 seq129 123 5e-23 seq36 91.5 3e-13 >seq21 Length=1112876 Score = 168 bits (186), Expect = 1e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | ||| || || |||||||||||||| Sbjct 502523 ACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 502464 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||| | || || |||||| || Sbjct 502463 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGG 502404 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || || Sbjct 502403 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 502344 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||||||||| || || | ||||| ||||| |||||||| || Sbjct 502343 CTCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTT 502293 >seq17 Length=1920523 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||| | ||| || || || |||||||| |||| Sbjct 1066913 ACCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGA 1066972 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| || ||||| ||||| ||||| || Sbjct 1066973 GAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGG 1067032 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || || | ||||||||||| |||| || || Sbjct 1067033 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAAC 1067092 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 1067093 CTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1067140 Score = 154 bits (170), Expect = 3e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || ||||| || | || ||| || || ||||||||||| | Sbjct 1066403 ACCACCACGAAGACGGAGCACCAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGA 1066462 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| ||||| || || |||||||| | || ||||| || || Sbjct 1066463 AAGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGG 1066522 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| |||||| ||||| || || |||| || || || || | |||| Sbjct 1066523 AATGCCCTCCTTGTCCTGGATC-TTGCTCTTCACATTATCAATGGTATCGGATGACTCGA 1066581 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| ||||| || ||||| || || | ||||| ||||| || ||||| Sbjct 1066582 CTTCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 1066630 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||| | || ||| || |||||||||||||| || Sbjct 1066631 ACCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGC 1066690 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || || || || ||||| || || ||||| |||| || || |||||| || Sbjct 1066691 AAGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGAGG 1066750 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| || || || | ||||| Sbjct 1066751 GATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCGAC 1066810 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093 || |||||||| ||||| || || | ||||| |||| ||| Sbjct 1066811 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGACTAT 1066852 Score = 111 bits (122), Expect = 3e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || || || || | || || || |||||||| ||||| Sbjct 1066176 CCACCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTC 1066235 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || | || || || || ||||| | ||| || || || ||| Sbjct 1066236 AGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGGGGA 1066295 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || || ||||| ||| || ||| | ||||||||||| || || || Sbjct 1066296 ATGCCCTCCTTATCCTGAATCTT-GCTCTTCACGTTGTCGATAGTGTCACTAGACTCAAC 1066354 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 1066355 CTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 1066402 >seq39 Length=918835 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || ||||||||||| ||||| || || || |||||| Sbjct 782437 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 782496 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || |||||||| ||||| ||||||||||| |||||||| | || || | ||| Sbjct 782497 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 782556 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| ||||| ||||| ||||| ||||||| ||||| ||||| Sbjct 782557 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 782615 >seq129 Length=448370 Score = 123 bits (136), Expect = 5e-23 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222 ||| |||| || | || | | |||| |||||||| | || ||| |||| || Sbjct 389680 ATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAGGCTCTTCCCTGTGCC 389621 Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 ||| |||||||||| |||| |||||| ||| || || || ||||| ||||||||| | Sbjct 389620 CTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTC 389561 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 | || || || || ||||||| || || || ||| |||||||||| || ||||| Sbjct 389560 CTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAA 389501 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 ||| || || || || || ||||||||||| |||||||| ||| || |||| | Sbjct 389500 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAAAAG 389441 Query 230403 CCCGGTGT 230410 ||||||| Sbjct 389440 GCCGGTGT 389433 >seq36 Length=1187627 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 315640 AATTCGCCACTGTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCC 315699 || ||| || |||| |||| | | || ||||| |||| ||||| || |||| | | Sbjct 10667 AACTCGGCAGAGTGAGTAATGATGATGACACCACCCTCGAACTTCTTCAGGGCCTTGGAC 10726 Query 315700 ATGGCACCGAGACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGG 315759 | |||||||||| || || || | ||||||| ||||| ||||||||||| | || Sbjct 10727 AGGGCACCGAGAGAGTCACGATCGAGGTAGTTGGTAGGCTCGTCAAGAACGATAAGATGA 10786 Query 315760 GGTTGTTGCCATAGAGC-GGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCC 315818 ||| | ||||| ||||| ||| | | || ||| | || ||||||||||| || Sbjct 10787 GGTCGCTGCCA-AGAGCAAGCGGCAAGGACAGTCTTGACACGCTGACCACCAGACAGACC 10845 Query 315819 ACGGATGCGAGAATGAG 315835 ||| |||||||| |||| Sbjct 10846 ACGCATGCGAGAGTGAG 10862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046598716150650