Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq114 246 3e-60
seq98 147 2e-30
seq91 129 6e-25
seq96 120 3e-22
>seq114
Length=1428553
Score = 246 bits (272), Expect = 3e-60
Identities = 548/810 (68%), Gaps = 18/810 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| ||||| || |||||||| | |||||| | |||||
Sbjct 112256 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 112315
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | ||| ||| | | | |||| ||| ||
Sbjct 112316 TCCAAGGATCTCCA-CGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTC 112374
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||| | || || || ||||| ||| || || || ||||||||||| || ||||||||
Sbjct 112375 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCG 112434
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| | ||||| ||| | ||||||| || || ||||||||||| |||||| ||
Sbjct 112435 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGAT 112494
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927
||||||| | ||||| || | || || |||||||||||| || | | || |
Sbjct 112495 GGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCGC 112554
Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987
| | ||| || | || || |||||||| ||||| || || ||| || | ||||||
Sbjct 112555 C--CAGCGAACCTACCTT--TTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGG 112610
Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047
| || ||||| | || |||||| | | || | |||| | | | || || || |
Sbjct 112611 CTGACTGGGCCATCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTG 112670
Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107
| ||||| || || ||||| ||||||| || |||||| | || || |||||||
Sbjct 112671 CTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCA 112730
Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|||| || || |||||||| || ||||| ||| |||||||||||||| | |||||||
Sbjct 112731 AGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGG 112790
Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227
|||| || ||||||||||| | || | || | | || | ||| |
Sbjct 112791 GTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCACCTAAAGGGCCGTGCCAGCAAGC 112850
Query 117228 CG-CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286
| | ||| || ||| |||| || || ||| |||| || ||| |||||||| ||
Sbjct 112851 AGATGATTCA-AGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCCTCACTGAG 112909
Query 117287 GCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTT 117345
|| | | || |||| || || || | || | || ||| ||| ||||| |||||
Sbjct 112910 GCTCTTCCCTGTGC-CCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTT 112968
Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405
|||||| || | || || ||| || | | || ||| |||||| | |||||||
Sbjct 112969 CGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAGGCCACCAACCC 113028
Query 117406 GCTGGACTTTATGAACCTCATCT-CCTTGG 117434
| ||||| ||| | ||||| ||||||
Sbjct 113029 CTTCGACTTCATGGAAAACATCTCCCTTGG 113058
>seq98
Length=1093051
Score = 147 bits (162), Expect = 2e-30
Identities = 162/213 (76%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || ||||| || || || |||||| | || || || |
Sbjct 288916 AAGATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 288975
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| || || | ||||| |||||||||||| | ||
Sbjct 288976 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 289034
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| |||||||||| || ||||| ||||| || || | |||||||| | ||||||
Sbjct 289035 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 289094
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||||| |||| || || || ||
Sbjct 289095 CAACATCCAGAAGGAGTCCACCCTCCACCTGGT 289127
>seq91
Length=1575054
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| ||||||||| |||| || || | ||
Sbjct 521674 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 521733
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | ||||| || |||| ||||| |||||||||||| | ||||||
Sbjct 521734 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 521793
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| | || | ||| ||||| ||||| || |||| ||||| ||| || ||||||
Sbjct 521794 CAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAAC 521853
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| ||||||||| | || || ||||| ||
Sbjct 521854 ATTCAGAAGGAGTCTACTCTTCATCTTGT 521882
Score = 111 bits (122), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| || || ||||||||| | || || || | |
Sbjct 522412 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 522471
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || |||| || || |||||||| ||| | || ||
Sbjct 522472 GACACTATCGACAACG-TGAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCTGATCA 522530
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || ||| |||| || | |||||||| | |||||| ||
Sbjct 522531 GCAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCCTGAGCGACTATAA 522590
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | || || || || ||
Sbjct 522591 CATCCAGAAGGAGTCAACTCTCCACCTCGT 522620
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755
||| |||| || || ||||| ||||| |||||||| | || ||||| | |||| | |
Sbjct 521962 ATAGTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGATACC 522021
Query 40756 GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815
| | | | ||| || || | ||||| ||||| ||||| | |||||||| ||
Sbjct 522022 ATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGC 522081
Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875
|| || | || || || || ||||| |||| || ||||| ||||||||||||||||
Sbjct 522082 CTGATTTTTGCTGGAAAGCAACTGGAAGACGGTCGAACCCTTGCCGACTACAACATCCAG 522141
Query 40876 AAGGAGGCCACGCTGCATCTAGT 40898
||||| | || || ||||| ||
Sbjct 522142 AAGGAATCTACCCTTCATCTCGT 522164
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || || || ||||| || | || ||||| | ||
Sbjct 522184 ATGCAAATCTTCGTCAAGACCCTTACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 522243
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || || | ||||| ||||| || ||| |||| ||
Sbjct 522244 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCGGATCAA 522303
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| |||||||||| || ||||| || || || || | || || || ||||||||||
Sbjct 522304 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 522363
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| |||||||| | || || || || |||
Sbjct 522364 ATTCAGAAGGAATCTACTCTTCACCTGGTG 522393
>seq96
Length=874474
Score = 120 bits (132), Expect = 3e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | |
Sbjct 746763 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 746704
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| |||||||| ||| ||||||| || |||||
Sbjct 746703 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGACTG 746644
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || || || || || || | || || ||| |||||||||||||||||||
Sbjct 746643 ATCTTCGCTGGTAAGCAACTCGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 746584
Query 40879 G 40879
|
Sbjct 746583 G 746583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218201762800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |