Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq91 113 3e-20 seq98 96.9 2e-15 seq96 84.2 1e-11 >seq91 Length=1575054 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || || || | |||| || ||||| |||||||| || || || ||| |||| Sbjct 521885 AGAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCC 521826 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| |||||||| | || ||||||||| ||| | || ||||||||| Sbjct 521825 TCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 521766 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | |||| || || || || | |||||||| Sbjct 521765 TGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 521706 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || || || || ||||||||||| Sbjct 521705 TTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 521674 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | |||| ||| ||||| |||||||||||||| || ||| | || Sbjct 522395 AGCACCAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCCATCC 522336 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||||| || || ||||| ||||| || || ||| | | ||||||||| Sbjct 522335 TCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCCGGGGGAATACCCTCCTTGTCC 522276 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | ||||| || ||||| |||| || ||||| Sbjct 522275 TGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAATGGTC 522216 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || || || || ||||| ||||| Sbjct 522215 TTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 522184 Score = 95.1 bits (104), Expect = 8e-15 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||||| || || |||| |||| ||||| || || || Sbjct 522147 TTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAA 522088 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| || ||||||||||| || | | ||||||||| ||||| ||| | || Sbjct 522087 AATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACATT 522028 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | ||||| ||| ||||| || | |||||||| ||||| ||||| || || || Sbjct 522027 GTCGATGGTATCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 521968 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || ||||| ||||| |||||| | Sbjct 522638 CCACCGCGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGCTC 522579 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || ||||||||||| || ||||| || || |||||||| || ||| Sbjct 522578 AGGGTGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGA 522519 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | | | | || | || | || || || Sbjct 522518 ATGCCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACC 522459 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || || |||||||| ||||| || |||||||| Sbjct 522458 TCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 522412 >seq98 Length=1093051 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || || ||||| |||||||||||| ||| ||| | || Sbjct 289130 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 289071 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || ||||| ||||||||||| ||| | || ||||||||| Sbjct 289070 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 289011 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || || || || | ||||| || Sbjct 289010 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 288951 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || ||||| || || || || ||||||||| Sbjct 288950 TTCCCTGTGAGGGTCTTGACGAAAATCTGCATC 288918 >seq96 Length=874474 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||||| || ||| | || || | ||||| || ||||| || Sbjct 746585 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 746644 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||| ||||| ||| | || ||||||||| ||||| ||| | || | | Sbjct 746645 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 746704 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | || | || ||||| || | |||||||| ||||| || || || ||||| || Sbjct 746705 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 746763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071389696800