Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq98 105 5e-18
seq91 102 6e-17
seq96 95.1 1e-14
>seq98
Length=1093051
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| |||| ||| | || ||
Sbjct 289127 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 289068
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || || | ||||| ||||| || || | ||||||||||||
Sbjct 289067 AGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 289008
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| ||||||||
Sbjct 289007 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 288948
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
|| || || ||||| || || || ||||| ||||||
Sbjct 288947 CCTGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 288912
>seq91
Length=1575054
Score = 102 bits (112), Expect = 6e-17
Identities = 140/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||||||||||||||| || || ||| |||| || || || || ||||||||
Sbjct 521865 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 521806
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||| || || |||||||| || | |||||||||||| ||| || ||| ||
Sbjct 521805 AATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATT 521746
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | |||| | ||| ||||| | ||| || |||||||| || || ||||| ||
Sbjct 521745 GTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTCTTGAC 521686
Query 45325 AAAGATTTGCATGTTG 45340
||||| |||||| ||
Sbjct 521685 GAAGATCTGCATGGTG 521670
Score = 89.7 bits (98), Expect = 4e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||| |||||||||||| || ||| |||| |||||||| ||||| || ||
Sbjct 522146 TCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGACCGTCTTCCAGTTGCTTTCCAGCAAAA 522087
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|||| ||||| ||||| ||||| | |||||||||||||
Sbjct 522086 ATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 522048
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||| |||||| |||| |||| | || |||| || || || |||||
Sbjct 522603 CTCCTTCTGGATGTTATAGTCGCTCAGGGTGCGACCATCTTCCAACTGCTTACCAGCGAA 522544
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| || || || || | |||||||| ||| ||| || ||| ||
Sbjct 522543 GATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGAATCTTGCTCTTCACGTT 522484
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | |||| | | ||| ||||| | ||| || ||||| || || |||||||||||
Sbjct 522483 GTCGATAGTGTCACTAGACTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTCAC 522424
Query 45325 AAAGATTTGCAT 45336
|| || |||||
Sbjct 522423 GAAAATCTGCAT 522412
>seq96
Length=874474
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Plus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203
||||||| |||||||||||| || | ||| ||| ||| ||||| || || ||||
Sbjct 746583 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCG---AGTTGCTTACCAGCGA 746639
Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263
| |||| ||||||||||| || || | |||||||||||| || || ||| ||
Sbjct 746640 AGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACAT 746699
Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | ||||| ||| ||||| | ||| || |||||||||||||| |||||||
Sbjct 746700 TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCA 746759
Query 45324 CAAA 45327
| ||
Sbjct 746760 CGAA 746763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074453678255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |