Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06] 155 sequences; 43,166,078 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq114 226 4e-54 seq67 141 1e-28 >seq114 Length=1428553 Score = 226 bits (250), Expect = 4e-54 Identities = 565/845 (67%), Gaps = 25/845 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| |||||| |||| ||||| ||||| | || ||| | || || Sbjct 112256 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 112315 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || |||||| ||||| || | || Sbjct 112316 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 112375 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | || ||||| || | ||| ||||| || |||||||| || || || || || Sbjct 112376 CACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAG-CG 112434 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGA 125256 |||| | ||| | || || |||| |||| ||| ||||| ||||| ||||||| Sbjct 112435 ATTCAGTGGCGAGGTCCAGATCCCCGAGGC-TCGTTGTTTCTACGGCTTCCAGATCATGA 112493 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315 | |||||| | ||||| || | ||||| || || |||| || || || || | Sbjct 112494 TGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTATATCAAGGAGCCCG 112553 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 | | ||| | || || ||||| || || || | || | || || || |||||| Sbjct 112554 CCCAGCGAACCTAC-CTTTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCT 112612 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| || || |||||| | || | | ||||| | ||| | | || || || Sbjct 112613 GACTGGGCCATCCGATGGATCCAAGATAAGGACTCTTCCTTTGCCCAACGTCTCGTTGCT 112672 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 ||||| || || ||||| |||||||| ||| || || | || || ||||||||| Sbjct 112673 TTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATTTTCTGGCTCAAG 112732 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || |||||||| || ||||| | ||||||| | || ||||| |||||||| Sbjct 112733 AAGCGTGGTCTCATGCCTGGTCTGACCTTCTCTAACGAGCTCATCTCTCGTGACGAGGGT 112792 Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615 || ||| |||||||||| || || | ||| | | | || || | || Sbjct 112793 CTTCACACTGACTTTGCCTGCCTCCT------CCACTCT---CACCTAAAGGGCCGTGCC 112843 Query 125616 AGCGATGAAAAGGTCATCA--ACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673 ||| | | | | | ||| | || | || |||||||| | || ||||| ||||| | Sbjct 112844 AGCAAGCAGATGAT--TCAAGATATCATCACTGATGCCGTCACCATTGAACAGGAGTTCC 112901 Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733 | || || | || || | | | |||||||||| | || ||| |||||| Sbjct 112902 TCACTGAGGCTCTTCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACA 112961 Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACG 125790 | ||||| || || |||||||| || || ||||| || ||| | ||||| | Sbjct 112962 TTGAGTTCGTCGCTGATCGTCTCCTTGTCG---CTCTTGGCAACGAGAAGGTCTACAAGG 113018 Query 125791 CCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCG 125850 ||| || ||||| || |||||| | ||| || || | || ||||||||||| |||| Sbjct 113019 CCACCAACCCCTTCGACTTCATGGAAAACATCTCCCTTGGCGGCAAGACCAACTTCTTCG 113078 Query 125851 AGAAG 125855 ||||| Sbjct 113079 AGAAG 113083 >seq67 Length=1756221 Score = 141 bits (156), Expect = 1e-28 Identities = 307/450 (68%), Gaps = 12/450 (3%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || ||| | ||| ||||| | || ||||||||| | || Sbjct 1591795 CAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCCGAT 1591736 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || | || || ||| || || |||| || ||| | ||| Sbjct 1591735 GTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGAC 1591676 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052 | || ||| || ||| | || ||| | ||||||||||| || || |||||| Sbjct 1591675 CTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACGGTG-- 1591618 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || ||||||||| | || || || || |||| |||| || || ||| Sbjct 1591617 -ACTGGACACTTATGTGCCCCAATGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAG 1591559 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGC 97171 || ||||| |||| |||||| | | |||| | || |||||| || | || Sbjct 1591558 TTCGAGGCTCTGTACGAAAAGTACGAGAAGGCGGGCAAGGGTCGCAAGACGA-TCAAGGC 1591500 Query 97172 ACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 | |||| || ||| | |||| || ||| ||| ||| ||||| |||| || | ||| Sbjct 1591499 TC-AGAAGCTTTGGTACGCCATTCTTGA-GGCCCAGACTGAGACCGGAAACCCATTCATG 1591442 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 |||||||||||| || || ||||| || |||||| || | || |||||| || Sbjct 1591441 CTCTACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGGTACCATCCGAAGC 1591382 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 |||||||| ||||| |||||| | |||||| Sbjct 1591381 TCCAATCTTTGCACTGAAATTATCGAGTAC 1591352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057764197800