Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20proliferatum_20[genbank_20GCA_5F900029915.1_202016-12-06]
155 sequences; 43,166,078 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq114 118 1e-21
>seq114
Length=1428553
Score = 118 bits (130), Expect = 1e-21
Identities = 540/850 (64%), Gaps = 10/850 (1%)
Strand=Plus/Minus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| || | ||||| || ||||| || || || || || | | || || |||
Sbjct 113103 TTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTT 113044
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGA-AAT 33131
|||||||| || || || ||||| | || || | || | | |||| || ||
Sbjct 113043 TCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGT-TGCCAAGAGCGACAAG 112985
Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191
| | ||| |||||||| || || || ||||| | ||| | ||||| || | |||
Sbjct 112984 GAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAG 112925
Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
| ||||||||| |||| || || || |||||||||| || ||||| || || ||
Sbjct 112924 GGCACAGGGAAGAGCCTCAGTGAGGAACTCCTGTTCAATGGTGACGGCATCAGTGATGAT 112865
Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311
| | || | | | || | | | || || | | || || ||
Sbjct 112864 ATCTTGAATCATCTGCTTGCTGGCACGGCCCTTTAGGTGAGAGTGGAGGAGGCAGGCAAA 112805
Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371
|| ||| ||||||||||| | | || || ||||| || || || || || |||||
Sbjct 112804 GTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCAT 112745
Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431
|| |||||||| || ||||| || || || ||||| | ||| |||||||| || ||
Sbjct 112744 GAGACCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGCACCACTGAAGAAGATACCCTC 112685
Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCGCTGTCATGTATCCA-CT 33487
|| ||||| || |||| || | | || || | | | || || ||||| |
Sbjct 112684 AACAGCAGCGAAAGCAACGAGACGTTGGGCAAAGGAAGAGTCCTTATCTTGGATCCATCG 112625
Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547
|| ||||| || ||||||||| | || || || || || ||||| || || || |
Sbjct 112624 GATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAAAGGT 112566
Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607
|| || | || || | ||| || ||||| | || || | || || |
Sbjct 112565 AGGTTCGCTGGGCGGGCTCCTTGATATAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGT 112506
Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667
||||||| || || ||||| || ||||||||||| | |||||||| ||||| || |
Sbjct 112505 GAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGACCT 112446
Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727
| || ||||| || | | || || || || || || ||| ||| || || || |
Sbjct 112445 CGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGAAAG 112386
Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGA 33784
| | | || | || | | || || | || | | || ||||| || | ||
Sbjct 112385 CAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTCGTGGA 112326
Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844
||| || || | || | || || | ||||| || || ||||| ||||| || ||||
Sbjct 112325 GATCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCTTGTACA 112266
Query 33845 TGTTCCAGAT 33854
| | ||| ||
Sbjct 112265 TTTGCCAAAT 112256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622945993039800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |